Xiphophorus hellerii (green swordtail): 116711839
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Entry
116711839 CDS
T07363
Symbol
u2surp
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116711839 (u2surp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xhe03041
]
116711839 (u2surp)
Spliceosome [BR:
xhe03041
]
Complex A
U2 snRNP components
U2 related factors
116711839 (u2surp)
Complex B
116711839 (u2surp)
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Paralog
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
SET_assoc
RRM_7
Motif
Other DBs
NCBI-GeneID:
116711839
NCBI-ProteinID:
XP_032407285
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Position
21:15780005..15793098
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AA seq
972 aa
AA seq
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MADRTPGSQKASAKALLESKLKSFSIGKMAVAKRTLSKKEQDEIKKKEDERAAAEIYEEF
LAAFEGGGEGKVKAFVRGGLANASKEESSSDEKRGKLYKPKSRFETQPKSILPLETPSQF
LPADKRNTLKKGSEKEKKKSNLELFKEELKQIQEERDERHRMKGRVSRFEPLPGSEGRRS
SDGSSRRNRPSSVLDDCAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVK
IMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMNFEMKLGWGKGVPIPPHPIY
IPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMIPPPKNKEEFEKTLSQAIVKVVIPTE
RNLLSLIHRMIEFVVREGPMFEAMIMNREINNPMYRFLFDNQSPAHVYYRWKLYTILQGE
SPAKWRTEDFRMFKNGSLWRPPPLNPYLHGPYDDGDEEEEEEEGNKKGSLKEEERDKLEE
MLRGLSPRRGDVAEAMLFCLNHAEAAEEIVECIAESLSILKTPLPKKIARLYLVSDVLYN
SSAKVSNASYYRKYFETKLSQIFADLNATYKTIQGHLQSENFKQRVMSCFRAWEDWAVYP
DPFLIKLQNIFLGLVNLSSEKEVPLVVEPEPAEDLDGAPLGEFVDGAPLEDVDGVPIDAV
PIDGAPIDGAPLDDLDGVPIKSIDDDIDGIPLDQSAGATFKVAPSKWEAVDEAELQAQAV
TTSKWEIFEQPEESKKGEADSDDDDRSPRSEDNQSYSNPIRDDSDMKAKMSEMNEEKRTK
LREIEVKVMKFQDELESGKRPKKPGQSIQEQVEHYRDKLLQKEKEKEKLEREKEREKKEK
EKAEARLKELKKEKEKDDTPTRKERKRHHSGSPSPSRSGSRRGRSSSPRSERSERSERSD
RSYSKDTSSRSSHKDSPRSSNKKSSKRSPSSPRTPKRSRRSRSRTPKKSTKKSRSRSRSP
HRSHKKSKKSKH
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccgaacgcctggctctcaaaaagctagcgctaaggcgctgcttgagagcaaa
ctcaagtctttcagcattggtaagatggctgtggcaaaaagaactttaagcaagaaggaa
caagatgaaataaagaaaaaggaagatgagcgagcagcggcagagatttatgaagagttt
cttgctgcttttgaaggaggaggagagggcaaggtcaaagcatttgtccgagggggtctt
gcaaatgcatccaaagaggaatcatcttctgatgagaaaaggggaaagctatacaagccc
aaatcccgttttgagacccagccaaaaagcatcctgcctttggagactccatctcagttt
ttaccagcagacaaaagaaatactttaaagaagggcagtgaaaaggaaaagaagaagagt
aacttggaactttttaaagaagaacttaaacaaatccaagaagaaagggatgaaagacac
cggatgaaaggacgcgtcagtcgcttcgagcctctgcctggatcagagggaagacgctcc
tcggatggttcttcaagaagaaaccgtccgtccagtgttttggacgactgcgcgccagga
tcccatgatgtcggcgatccatccactactaacttgtatcttggaaacatcaatccacag
atgaatgaggagatgttgtgtcaagaattcgggcggtatggccctctggccagcgtgaaa
atcatgtggcccaggacggatgaggagcgagctcgggagaggaactgtggatttgtggcc
tttatgaacaggagggatgctgagcgagccctcaagaacctaaatgggaaaatgatcatg
aactttgaaatgaaattaggatggggcaaaggtgtgcccattccccctcaccccatatat
atccctccctccatgatggagcatacactcccaccccctccctccggcctacccttcaac
gcgcagccccgagagaggctaaagaaccccaatgctccaatgattcctccacccaaaaac
aaggaggagtttgagaagactctgtcgcaagccatagtcaaagtggttatcccaacagaa
aggaatctgctctctcttatccaccgcatgatcgaatttgtggtgcgtgaaggcccaatg
tttgaagccatgatcatgaacagagaaatcaacaatccaatgtacaggtttttatttgac
aaccagagcccggcacacgtatactatcgttggaagctctacactatactacagggtgaa
tccccggccaaatggcgaacagaggactttagaatgtttaaaaatggctctttatggcgt
ccgcctcctcttaatccgtacctacacggtccttatgatgatggtgatgaagaggaggaa
gaggaggagggaaacaagaaaggctccttgaaagaagaggagcgggacaaactggaggag
atgctccgcggtctgtctccgaggagaggagacgtggcagaggccatgctgttttgtctg
aaccacgctgaagctgctgaggagattgtggagtgtatcgccgagtccctctccattctg
aagacccctctaccaaagaagattgcacggttatatctcgtttctgatgtgctgtacaac
tcttctgccaaagtatccaatgcgtcttactacagaaaatattttgagacgaagcttagc
cagattttcgctgatctcaacgccacatacaagacgatacaaggacacctgcagagcgag
aacttcaagcaacgagtgatgtcatgtttccgggcgtgggaggattgggctgtgtaccct
gatccctttcttattaagctgcagaatattttccttggacttgttaatctctcctcggaa
aaggaggtccctcttgttgtagagcctgaacctgcagaagacctcgatggggcccctctg
ggggagtttgtagatggagcccctctggaggacgtggatggggtccctattgatgcagta
cccattgatggggcgccaatcgatggagctcctctcgatgatttagacggggttcctatt
aagtccattgatgacgacatcgatggaatacctctggatcagtcagcgggagcgactttc
aaggttgcaccctcaaaatgggaagcggtggatgaggcagagttacaggctcaagctgta
acaacctcaaaatgggagatatttgagcagccggaagaatcaaagaagggtgaggcagac
agtgatgatgacgacaggagccctcgctcagaggataatcagagctactccaaccccatc
agagacgactctgatatgaaagccaagatgtctgaaatgaatgaggagaaacgcaccaag
ctcagagagattgaggttaaagtcatgaagttccaggatgagctggagtctgggaaaagg
cccaagaagcctggacagagtatccaggagcaggtggagcactacagggacaaactgcta
cagaaggagaaagaaaaagagaaacttgagcgtgagaaagaaagggagaaaaaagaaaag
gagaaagcagaggcgcggttaaaagaactgaagaaggaaaaggagaaggatgacacacca
accaggaaagaaagaaagcggcatcacagtggctcccccagtccatcgaggagcggcagc
agacgaggccggtcatcctcgccgcggtcagagcgctcagagagatcggaacgctccgat
cgatcatactctaaagacacatcgtcacgctcatcccataaagactctcctcggtccagc
aacaaaaaatcgtccaagagatctccatcttcacctcgcacaccgaagcgatcgaggcgg
tcgcgctccaggacacccaagaaatcaaccaagaagtcccgctccagatctagatccccc
caccgatctcacaagaaatctaagaagagcaaacactga
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