Xiphophorus hellerii (green swordtail): 116711873
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Entry
116711873 CDS
T07363
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7 isoform X1
KO
K09447
interferon regulatory factor 7
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04620
Toll-like receptor signaling pathway
xhe04621
NOD-like receptor signaling pathway
xhe04622
RIG-I-like receptor signaling pathway
xhe04623
Cytosolic DNA-sensing pathway
xhe05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
116711873 (irf7)
04621 NOD-like receptor signaling pathway
116711873 (irf7)
04622 RIG-I-like receptor signaling pathway
116711873 (irf7)
04623 Cytosolic DNA-sensing pathway
116711873 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116711873 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116711873 (irf7)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
116711873 (irf7)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
116711873
NCBI-ProteinID:
XP_032407351
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All DBs
Position
2:15985727..15989241
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AA seq
440 aa
AA seq
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MQSPPKPQFASWLIEQVETGQYMGLCYVDQNKFRVPWKHNSRKDCNDEDSKIFRAWAVAS
GKINEFPNDKARWKTNFRCALNNLSQRFKMITDNSKNQDDPHKIYEIMNTDSNYEGMPMQ
ESQEESDMTPDIFSPITEYFPTGNEHNLHQDFMALDLGNQSAEAQLWTRHNNPVLSCLTA
TENLPQYLPADQTAYNQAVNASPVISSPQPFSLCDLEISIHYRKKEMLKTMLHTNRLQLH
YHSEDPKFNASYLCFPSTEGLLDHKQIEYTNRILSSIQRGLLLEVHETGIYARRHDNCHV
FVSTSDPNVAHPNPQKLPKNTVVELLSFDKYVNELKHFKENNGRSPEYTINMCFGEKFPE
GKPLEKKLVVVKVVPLICRYFHDMAQMDGASSLHSANISLQISHNSLFDLISSVFSLPGA
EEQLTIGVPFIDQTGNLISH
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtccacccaagcctcagtttgccagttggctcatcgagcaagtggagacgggc
cagtacatggggctgtgctacgtggatcaaaacaaattcagagtgccgtggaagcacaac
tccaggaaagactgcaacgatgaggacagtaaaatattccgggcctgggcagtggcgagt
gggaaaatcaacgagttccccaatgacaaggccagatggaaaaccaacttccgctgtgct
cttaacaacctgtctcagcgcttcaagatgatcacagataattccaagaatcaagacgac
cctcataaaatctatgagattatgaacactgacagcaactatgaaggtatgccaatgcaa
gaatcccaggaggaatctgacatgactccagatatattcagcccaatcacggagtatttt
cccacaggaaatgagcacaatctgcatcaggacttcatggccctggatcttggcaaccaa
tcagcagaagcgcagttgtggacacggcataataatcctgttctcagttgtcttaccgca
actgagaaccttccgcaatatttaccagccgatcagacggcctacaatcaagcagtaaat
gcttctccggtgatcagttcacctcagccgttcagtctgtgcgacctggagatctccatc
cattacaggaagaaggaaatgctgaagacgatgctacacactaaccgtcttcagctccac
taccacagcgaggaccccaagttcaacgcctcttatctctgctttccttccactgagggc
ctactggaccataaacagattgaatacaccaaccgcatactgagcagcatccagcgaggc
ctgctcttggaggtacatgagaccggtatctatgccaggaggcatgacaactgccacgtg
tttgtcagcaccagcgaccccaacgtagctcatccaaacccccaaaaattgcccaaaaac
acagtggtggagctcctcagttttgacaaatatgttaatgagcttaaacatttcaaggag
aacaatggccgctctcctgaatacaccatcaacatgtgctttggagagaagtttccagag
ggaaaaccgctggaaaagaaacttgtcgttgtgaaagtggtgcctctaatttgtcgatat
tttcatgacatggcccagatggatggggcttcatctcttcacagcgccaacatcagcctg
cagatttcacacaacagcctctttgacctcatcagctctgtgttttctctaccaggagct
gaagagcaactaaccattggtgtgcctttcatcgatcagactggaaacttgatttctcac
tga
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