Xiphophorus hellerii (green swordtail): 116711889
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Entry
116711889 CDS
T07363
Name
(RefSeq) receptor-type tyrosine-protein phosphatase mu-like isoform X1
KO
K05693
receptor-type tyrosine-protein phosphatase mu [EC:
3.1.3.48
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04514
Cell adhesion molecules
xhe04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116711889
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
116711889
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xhe01009
]
116711889
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116711889
Enzymes [BR:
xhe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
116711889
Protein phosphatases and associated proteins [BR:
xhe01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
116711889
Cell adhesion molecules [BR:
xhe04515
]
Immunoglobulin superfamily
Type II RPTP family
116711889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
ig
PTP-SAK
I-set
DSPc
Ig_2
Ig_3
Ig_DSCAM-DSCAML_C
Tc-R-P
PTPlike_phytase
Pur_ac_phosph_N
Y_phosphatase3
DUF4954
Motif
Other DBs
NCBI-GeneID:
116711889
NCBI-ProteinID:
XP_032407372
LinkDB
All DBs
Position
21:26120505..26201836
Genome browser
AA seq
1526 aa
AA seq
DB search
MERTGSFPLPAVLLLVLLGVRGARADTFQACLAGQGPDCTLVQSKEDDFDWEQGDTRGRP
NSNPWIPAGTSFLFVNTSGRYSGQRAQLLLPPLRENDTHCLSFQFYQAGGREGAAPATLN
VYVTENNSPLGVPVINSSGPAYHIWKGVELAVSTFWPNHYQVLFEAVSTGQRGVLAIRDI
TLQGHQCMSTPHPLHLKAVEVNAGQTASFQCTVNGQPQRHLLLYLQGMGGRQAVAKETRP
VNPRRYVASFDVKNTTKGDSGRYRCIVQSDRGVGVSSYADLTVKQPPVPIAPPQLTAVGA
TYLWIQLNANSINGDGPIVDREVEYRTTAGMLIDTTPVDKPTHKIGHLDPDTEYEISVLL
TRPLEGGTGNPGPPLRARTKCADPMHGPRRLLVADVQSKQVTVRWQPFGYNVTRCHRYNL
TVQYRYRPAGATREVKEQVGEEVVSDTMSVQPQHTVRNLPPFTNVSLKLLLSNQEGHKES
EELLVLTDQDVPGAVPVDSILGRSYEQQIGLSWREPQHAYGLIRHYEITYKALSSFDTEF
DLSNQSGKVLKAANETSHVFSGLSPGSTYSFTIRASTIKGFGPPVITQFTTRISAPLMPP
YDQEPPLNQTDSSVTVLLKPAQSRGAPVSKYQVVVEEERPRRLKRGTAEILRCYPVPIHF
QNASLLNSQYYFSAELPMTDLRSPTPFCVGDNRTYGGYWNAPLLPHKSYGVYYQAVSSAN
GETKIDCVRVATKAAIIATQLTTPYVGVAPAAGNKQLTGTATRKPEPEQEKQTDHTVKIA
GSIAGILLFIIIFLGVILLMKKRRRNYHSYTYYLKLAKKRKETLSSRQEMTLMVNSSQHT
AMVDTHTLNGRTMSSPSSFTLKTNTISTSVPNSYYPDPFVPTAILVPINDDSSHTMTSET
SSLVQSHYKQREAEREALPYQTGQLHPAIRVADLLQHITQMKCAEGYGFKEEYESFFEGQ
SAPWDSAKKDENRMKNRYGNIIAYDHSRVRLQPQDGDGGSDYINANYVDGYHRPNHYIAT
QGPMQETLYDFWRMVWQENSAALVMVTNLVEVGRVKCCKYWPDDTEIYGDMKVTLIETQL
LSEYVIRTFAVEKVGDDDDDDEGEAVTLCLHDNPFCPQRGVAEIREIRQFHFTGWPDHGV
PLHATGLLGFIRCVKAKTPPTAGPTVVHCSAGAGRTGCFMVIDIMLDMAEREGVVDIYNC
VRELRARRVNMVQTEEQYVFIHDAILEACLCGNTAVPGNQLRSLYYEMNRLDPQTNSCQI
KEEFRTLNMVTPTLRVEDCSIALLPRNHEKNRCMDVLPPDRCLPFLITIDGESSNYINAA
LMDSYKQPSAFIVTQHPLPNTVKDFWRLVLDYHCTSIVMLNDVDPAQLCPQYWPENGVHR
LGSLQVEFVSADLEEDVISRIFRIYNTARPQDGYRMVQQFQFLGWPMYRDTPVSKRSFLK
LVHQVDKWQDEYDGGEGRTVVHCLNGGGRSGVFCSVSIVCEMLRQQRCVDVFHAVKTLRN
NKPNMVDLLEQYKFCYEVALEFLNSA
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
atggagcggactggaagtttcccgctgcccgcggttctcctcctggttctgctgggagtt
cggggagcgcgagcggacaccttccaagcatgcctggccggtcagggcccagactgcact
ctggtccaatccaaggaggacgactttgactgggagcagggcgacaccagagggcggccc
aacagcaacccatggatccctgcaggtacttccttcctgtttgtgaacacatcgggtcgc
tacagcggccagcgcgcccagctgctgctgccgccgctccgcgagaacgacacgcactgc
ctcagcttccagttctaccaggcggggggccgcgagggggccgcgccagccacactcaac
gtctacgtgacagagaacaacagccctctgggagttcctgtcattaactcttctggcccc
gcctaccacatctggaaaggggtggagcttgctgtatccactttctggccaaatcactac
caggttctgtttgaggcggtcagcaccgggcagagaggagtcctggccatcagagacatc
actctgcagggacatcagtgtatgagcacaccccacccgctgcaccttaaggcggtggag
gtgaacgccggccagacggcctccttccaatgcacggtgaacggccagccgcagcgccac
ctgctgctctacctgcagggcatggggggtcggcaggccgttgccaaggagaccaggccg
gtgaacccccggcgttacgtggcgagcttcgacgtcaagaacacgaccaaaggagactcg
ggacgctaccgctgcatcgtccaatcagatcgaggagtgggcgtgtcctcctacgcagac
ctcacagtcaaacaaccaccggtaccaattgccccacctcagctcactgcggtcggcgcc
acctacctctggatccaactcaacgccaactccatcaacggagacggacccatcgttgac
agagaggtggagtaccgtacgacggcgggcatgctgatcgacaccacacctgtcgacaag
cccacccacaagatcggacacctggacccagacacagagtacgagatcagcgttctgctg
accaggcccctggaaggagggactgggaaccccgggccgccgctcagagccaggaccaag
tgtgcagatccaatgcacggcccgcggcgcctcctggtggcagacgttcagtccaaacag
gtgacggtccgatggcagccgttcggatacaacgtgacccgatgccaccgctacaatttg
acggtgcagtaccgctaccggcctgcaggagccaccagggaggtgaaggagcaggtgggg
gaggaggtggtgtcggacaccatgagcgtgcagccgcagcacaccgtgcgtaaccttccg
ccattcaccaacgtcagcctgaagctgttgctaagcaaccaggagggacacaaggagagc
gaggagctgctggtgctgaccgaccaggacgtgcccggtgcggtcccggtggactccatc
ctgggccgcagctatgagcagcagatcggactgagctggagggagccgcagcacgcctat
ggcctgatccgccactacgagattacctacaaggctctgagctccttcgacacggagttc
gacctgtccaatcagagcggcaaggtgctgaaggcggccaatgagacgagccacgtgttc
tcggggctgtcgccaggctccacctactccttcacaataagagcctctaccatcaagggc
ttcgggcccccagtcatcacccagttcaccaccaggatctccgcccccctgatgccaccc
tatgaccaggagccccctctcaaccagaccgactcgtccgtcaccgtcctgctgaagccc
gctcagagccgcggcgcccccgtcagtaagtaccaggtggtggtggaggaggagcgcccc
cgcaggctgaagagaggaactgcagagatcctgcgctgctacccggttccgatccatttc
cagaacgcctcgctgctgaactcccagtactacttcagcgctgagctgcccatgaccgac
ctgaggagccccacgcccttctgcgttggagacaacagaacctacggcggctactggaac
gcgccgctgctgccgcacaagagctacggggtctactaccaggccgtgagctcggctaac
ggggagacaaagatcgactgtgtgagagtcgccaccaaagctgccataatcgccacccag
ctcaccacgccgtacgttggggtggccccggcggcgggcaacaagcagctgacaggaacg
gcaaccaggaagccagaaccagagcaggagaaacagacggaccacacggtgaagatcgct
gggtccatcgctggcatcctcctcttcatcatcatcttcctgggagtcatcctcctgatg
aagaaaagacgaagaaattatcactcctacacttactacctgaagttggccaagaagagg
aaggaaacactgagctccagacaggaaatgactctgatggtgaacagctcccaacacaca
gccatggtggacacacacactctgaacggccgcaccatgtcgtctccgtcttctttcacc
ctgaagacaaacaccatcagcacctccgtccccaactcctactatccagacccattcgta
ccgacagccatcttggtgcccattaatgacgacagcagccacaccatgaccagtgaaacc
agcagcctggtccagtcccactacaagcagcgggaggcggagcgggaggcgctgccctac
cagacgggtcagctgcatccggccatccgggtcgccgacctgctgcagcacatcacccag
atgaagtgtgccgagggctacgggttcaaggaggagtacgagagcttcttcgagggacag
tctgctccctgggactcagccaagaaggacgagaaccgcatgaagaaccgatacgggaac
atcatcgcctacgatcactcccgtgtgcgtctgcagcctcaggatggagacggcggctca
gactacatcaacgctaactatgtggatggttaccacagacccaaccactacatcgctaca
caagggcccatgcaggagacgttgtatgacttctggaggatggtgtggcaggagaactca
gcggctctggtgatggtgaccaacctggtggaagtgggccgggtgaagtgctgtaagtac
tggcctgatgacactgagatttatggcgacatgaaggtgacgctgatcgagacgcagctg
ctgtctgagtacgtgatccggaccttcgccgtggagaaggtgggtgatgatgatgatgat
gatgaaggtgaagctgtgaccctctgtcttcatgataaccccttctgcccccagaggggc
gtggctgagatcagggagatccgtcagttccacttcaccggctggccggaccacggcgtc
ccgctgcacgccaccggcctgctgggcttcatccgctgcgtcaaggccaagactccgccc
accgccggccccaccgtggtccactgcagcgcgggcgcgggccggaccggctgcttcatg
gtgatcgacatcatgctggacatggcggagagagaaggcgtcgtcgacatctacaactgt
gtcagagagctgagggcgcgaagggtcaacatggtgcagaccgaggagcagtacgtcttc
atccatgacgccatcttggaggcgtgtctctgcggaaacaccgccgttccgggcaatcag
ctgcgttcgctgtactacgagatgaaccgattggacccccagaccaactcctgtcagatc
aaggaggagttcaggaccctcaacatggtgacgcccaccctgcgcgtggaggactgcagc
atcgcgctgttgcctaggaaccacgagaagaaccgctgcatggacgttctgccgccggac
cgctgcctgcccttcctcatcaccatcgacggcgagagctccaactacatcaacgccgcg
cttatggacagctacaagcagccgtcggccttcatcgttacccagcatcctttgcccaac
acagtgaaggacttctggcgcctggttctagactaccactgcacgtccatcgtgatgctg
aacgacgtggaccccgcccagctgtgtccccagtactggccggagaacggcgtccaccgc
ctcggctcgctgcaggtggagttcgtctccgcggacctggaggaggacgtcatcagccgc
atcttcaggatctacaacaccgccaggccgcaggacgggtaccgcatggtgcagcagttc
cagttcctgggttggcccatgtaccgggacacgcccgtctccaagcgctccttcctgaag
ctcgtccaccaggtggacaaatggcaggacgagtacgacggcggcgagggacgcaccgtc
gtccactgcctgaacggcggcgggcgcagcggcgtcttctgcagcgtcagcatcgtgtgt
gagatgctgaggcagcagcgctgtgtggacgtcttccacgccgtcaagacgctcagaaac
aacaaacccaacatggtggacctgctggaacaatataagttctgctatgaagtggctctg
gagttcctgaactctgcttag
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integrated database retrieval system
