Xiphophorus hellerii (green swordtail): 116711910
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Entry
116711910 CDS
T07363
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3-like
KO
K04953
cyclic nucleotide gated channel beta 3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xhe04040
]
116711910
Ion channels [BR:
xhe04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
116711910
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF6033
CAF1A_acidic
Motif
Other DBs
NCBI-GeneID:
116711910
NCBI-ProteinID:
XP_032407417
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Position
21:complement(7937601..7949605)
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AA seq
735 aa
AA seq
DB search
MFSRLRRFLGAPEPPPAPATTPPTPPAPPAPPAKEEKLTEKKDEKVEEPKATSEKQEEKN
EEKQEEQINEQKKEEQTAGPAPVPPSPAPIAPVNPEGAEGGEPPVVYSRYADDVLRNVIK
SLRERTEILKEKTIDPYATSPEITPPVTPILRKEDYVRQKEEERIAKEEEDRKKAEEAAK
KAEEKKKKDEEKRLEAEKKAEEERLAEEARRKAKILPDISCSCFDVLFRPVEEKMDTVLG
STIDPFTDRRYITWLSVVAVAYNYNVWFCPTRLAFPYHNDTANPFWILLDVLSDIVNVID
IVVWQPRLQFVKAGDIIKDRALTKVHYRKSYRFQTDMFSIIPFDLLSLHFGFSSIYRFNR
FIRIESFFEFSDRLESIMAKAYIWRVARTTGYLLYMLHLNACAYYVASVYQGLASTTWVY
DGKGTAYLRCYYFAVRSLINIGGLPEPVTLFEITFQMTNFFVGVFVFSSLIGQMRDVIGA
ATAAQAYFRASMDGCVEYMNTYTIPKLVQNRVRTWYNYTWDSQGMLDEAELLDKMPLVMR
IAIAVDINLATFQKIQLFQGCDQQMLVDMLLRLKSIIYLPGDFVVRKGDIGKEMYIIKSG
AVQVVGGPDNSIVFVTLKAGCVFGEISLLQSAKDGGNRRTANVRAYGFANLFVLEKKDLF
DILVHYPESQKVLAKKGRQLVKAKAAAGAPTKDEKPKGLTLLGPKPPTPKLLKAFANLRK
AGLLDKLKKAAEEEQ
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccggttgaggaggtttctgggcgctcctgagcctccgcctgcccctgcaacc
accccgccaaccccaccagctccaccagctccaccagccaaggaggagaagttaacagaa
aagaaagatgaaaaagtagaggagccaaaggcgacaagtgaaaagcaggaggagaaaaat
gaagagaaacaagaggagcaaataaatgagcagaagaaggaagagcagacagctggtcct
gctcctgttcctccttctccagctcctattgctcctgttaacccagaaggggctgaagga
ggcgaacccccggtggtctactccagatatgcagatgacgtcctgaggaatgtcataaag
agtttgagagaacgaaccgaaatcctcaaagagaagactatagacccttatgctacatct
ccagaaatcactccacctgttacacccattttgaggaaagaggactacgtcagacagaag
gaagaggagcgcatagccaaagaagaagaagacaggaagaaggccgaggaagcagccaaa
aaggcagaggagaaaaagaagaaagacgaggagaaacgactggaggctgagaagaaagca
gaggaggagaggctggcggaggaggccaggaggaaggcaaagattctgccggacatcagc
tgctcgtgctttgacgtcctcttccgtccagtcgaggagaagatggacaccgtgttgggg
agcaccattgatcctttcacggatcgccggtatatcacctggttgtcggtcgtagccgtt
gcgtacaactacaacgtctggttctgccccacccggctggccttcccttaccacaacgac
actgccaacccattctggattttgctcgacgtcctctctgacatcgtcaacgtcattgac
atcgtggtttggcagcctcgactacagtttgtcaaagccggagacattattaaagacaga
gctctgaccaaagtgcattatcggaaatcttatcgatttcagacagacatgttcagcatc
atcccctttgaccttctctctctacacttcggcttctcctccatttacagattcaaccgc
ttcatcaggatagagtctttctttgagttcagtgaccgacttgagagtatcatggccaaa
gcttacatctggagggtggcccgtaccacaggttaccttctctacatgctccatctcaac
gcctgcgcttactacgtagcctcagtgtaccagggtctggcttcgactacatgggtgtat
gatggaaaaggcacagcgtacctgcgctgttattactttgcggtacgaagcctcatcaac
atcgggggcctcccggagccggtgactctgttcgagatcacctttcagatgaccaacttt
ttcgtcggcgtctttgtgttctccagcctgattggacagatgagagacgtcataggagcg
gccacggcagctcaggcgtacttccgcgcgtcgatggacggctgcgtcgagtacatgaac
acgtacaccatcccaaagctggtccagaacagagttcgcacctggtacaactacacctgg
gattctcagggaatgctagatgaggcggagctcctggacaagatgcctctggtgatgcga
atcgccatcgctgtggatataaacctggccaccttccaaaagatccagctttttcagggc
tgcgaccagcagatgttggtggacatgttgctgaggctgaagtccatcatctacctgccg
ggagactttgtcgtgaggaagggtgacatcgggaaggagatgtacatcatcaaaagcgga
gcggtgcaggtggtgggaggacccgacaacagcatcgtatttgtgacgctgaaggccggc
tgcgtgttcggggaaatcagcttgctgcaatctgccaaagacggagggaacaggcggaca
gccaacgtgagagcgtacggctttgcgaacctgttcgttctggaaaagaaggacctgttc
gacatcctcgtccactaccccgagtcccagaaggttttggccaagaagggcaggcaactg
gttaaagccaaagctgcagcaggggctccgaccaaggacgaaaagccgaaaggtctgact
ctgttaggaccgaaacccccaacgccaaagctcctcaaagcatttgccaacttgcgcaaa
gcagggctgctggacaagctcaagaaagctgcagaagaggaacaataa
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