Xiphophorus hellerii (green swordtail): 116712022
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Entry
116712022 CDS
T07363
Symbol
cdh7
Name
(RefSeq) cadherin-7
KO
K06799
cadherin 7, type 2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116712022 (cdh7)
Cell adhesion molecules [BR:
xhe04515
]
Cadherins
Major cadherins
116712022 (cdh7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
116712022
NCBI-ProteinID:
XP_032407578
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All DBs
Position
21:complement(18970013..19099772)
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AA seq
799 aa
AA seq
DB search
MGWCCSGICRALALLVLLFVLRGRGCCCWGLSPSSGDGEKSLRSDPDSWEALHRNKRSWV
WNQFFVLEEYTGNEPLYVGKLHSDVDKGDGKVKYVLSGEGATSIFTIDENTGDIHATKRL
DREAQAYYTLQAQAIDRITNLPVEPRSEFVVKVQDINDNEPKFLDGPYLAGVPEMSPLGT
MVVQVAATDADDPTYGNSARVVYSIIHGQPYFSVEPKTGVIRTALPNMDRETKDQYVLVI
QAKDMVGQMGGLSGTTSVTVTLTDVNDNPPRFTHKSYQYTVLESLPVQSVVARIKAADAD
IGSNAEMDYRIMDGDGPGMFNITTDEDTQEGVIILQKPLDFETRSGFALRIEATNRNIDS
NFLSLGPFSDITSMKVSVADVNEPPVFSTPLSKLNVSEDAKVGTSIGRVSAHDPDNSNSG
IRYSIDRNTDLERFFNVDALSGIISTAKSLDREANSIHNLTILAIESLDPNQIGKGITLI
TVLDVNDNAPVFAIDYETLLCENSMPGQVIQTISAVDKDEPLDGHRFNFALDGTVAGNLN
FTLRDNKDNTASILTKRGGFRRREQAVYRLPVLITDNGKPTLSSTNTLSVRVCDCDSDGV
ALSCGAVAYTATGLSTGALLAILGCIITLLVMVLLIVTMRRRRKQPLILEEERDIRENIV
RYDDEGGGEEDTEAFDMVTLRNLNIIRDPAARRDVTPDTPTFYQYTSASRPSYKSLPDNV
VFREFIWERLKDADVDPTAPPYDSLQTYAFEGSGSVAESLSSLESLSTDSDQNYDYLSNW
GPRFKKLADLYGNSDSMFS
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgggttggtgttgttcaggcatatgcagagccctggctctcctggtgctcctgtttgtc
ttgcgggggagaggctgctgctgttgggggctgagtcccagctctggggacggggagaag
tccctgcgctctgatccggactcctgggaggccctgcacaggaacaaacgcagctgggta
tggaaccagttcttcgttttggaggagtacacaggaaacgaacctctttacgtcggcaag
ctacactctgatgtggataaaggagacggcaaggtgaagtatgtgttgtctggtgagggg
gccacctctatcttcactattgacgagaacactggagacatccatgccacaaaacgcctc
gatcgggaggcccaggcttactacaccctccaagctcaagccattgaccggataaccaac
ttacctgtcgagccaaggtctgagtttgtggtcaaggtgcaggacatcaatgacaatgaa
ccaaagttcctggatgggccgtacctggcaggggtgccagagatgtcacctttaggaacc
atggtggtgcaagtggcagccacagatgcagatgacccgacttacgggaacagtgcccgg
gtggtctacagcatcatccacgggcagccgtacttctcggtggagcccaagacaggggtc
ataagaacagctttgcccaacatggaccgggagacgaaagaccagtatgtgctggtcatt
caggccaaagacatggtgggccaaatgggcggcctctccggcaccacctctgtcacggtc
actctcactgatgtcaacgacaacccacctcggttcactcacaaaagctatcagtacaca
gtgctggagtcgctaccagtgcaatctgtggtggccagaatcaaagcggcagatgctgat
atcggctccaacgcggaaatggactacaggatcatggacggtgacgggcccggcatgttc
aatataacaacagacgaggacacacaagagggggttattatcctgcaaaagcccctagat
tttgagacaagaagtggcttcgctctaagaatcgaggccacaaacaggaacattgactcc
aatttcttgagcctcggcccatttagcgacataacgtcaatgaaggtttccgtggcagat
gtgaacgagccgcccgtcttttctacaccgctttccaaactgaatgtttccgaggacgcc
aaagtgggcacctcaatcggtagagtctctgcccacgatccagataactccaacagtggc
atcaggtactccattgacaggaacacagacttggagcgttttttcaacgttgacgctttg
agtgggatcatcagcacagccaagtctctggaccgagaagccaactccatccacaatctc
accattttagccatcgagagcttggatccaaaccagattgggaaaggcataactctgatc
acggtgttggatgtaaatgataacgccccagtctttgcaatagactatgaaacgctcctg
tgtgaaaactcaatgccagggcaggtgattcagaccatcagtgcggtggacaaggacgaa
cctctggacggacatcgctttaatttcgccctggacggaaccgtcgctggcaacctgaat
ttcaccctgcgagataacaaagacaacactgcctccatactgacgaaacgaggtggcttc
aggagacgggagcaggccgtgtatcgactgcccgtgttgattacagacaacggaaaaccc
accctcagcagcacaaacacgctttcggtgcgcgtatgtgactgtgactcggatggcgtg
gccctgtcttgtggagccgtggcctacacggcaactggccttagcactggcgcccttctg
gctattctgggctgcatcattacacttctggtgatggttctgttgattgtgacaatgcgc
cggagaaggaagcagcccttgattctggaggaggagagggacatcagggagaacatcgtc
cgctatgacgacgaaggagggggagaggaagacacggaggccttcgacatggtcaccctg
cgcaacctcaacatcatcagagaccccgccgcacggcgagacgtcacgccggacactccc
accttttaccaatacacctctgcttcccgcccgtcctacaagtcgctgcccgacaacgtg
gtgtttcgagagttcatctgggagcggctgaaggacgccgacgtggaccccacggctcct
ccgtacgactccctgcagacgtacgccttcgagggcagtgggtctgtagctgagtcgctg
agctcgctggagtcactaagtacagactcggaccagaactacgactacctcagcaactgg
gggccgcgctttaaaaagctggccgatctgtacggcaacagtgacagcatgttctcgtag
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