Xiphophorus hellerii (green swordtail): 116712049
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Entry
116712049 CDS
T07363
Symbol
ube3c
Name
(RefSeq) ubiquitin-protein ligase E3C
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116712049 (ube3c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116712049 (ube3c)
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116712049 (ube3c)
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
HECT type E3
116712049 (ube3c)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
116712049
NCBI-ProteinID:
XP_032407644
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All DBs
Position
21:16441021..16469068
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AA seq
1081 aa
AA seq
DB search
MFSFEGDFKTRPKVSLGGASKKEEKASLLHRTQEERRKREEERKRLKNAIIIQSYIRGYQ
DLKQQYAIQRAKFDESVSQSQAEGTQHVLAATTLCLLSRRLIFFYRQSVDAHRLIWLCQN
LVKHNSQFVKLLNSPQKQTCVFQIKRILGFCCRLLQNCPDDSLNVAVPMRMLEIFSSERT
YLIVIPDANNVASLLEQILHYMVQKGYYKSLYSLVNHRLPSSLEYSDAPSIPLASTLLEH
ILKPLHFTYSSCTTGARQFVFAAFTEEFISAPFTEQIFHFFIPALSDRRLSFPFEAFLSS
LQVTIDSFSAAQSQAPWLFYFVLSAGENCLGSLSEEGHLLYLRALQALLPLLPVSESTSR
PEVNSDSEDDDDGDMHPTPMQDNSRISVQLITEECIHKLDTKQQTNALLNLVWRDSASEE
VFTMMASICHTLMVQHRLMVPKVRLLYSLAFNARFLRHLWHLITSMTTKMITGSMVPLLQ
LISRGSPMSFEDSNRIIPLFYLFSSLFSHSLISVHDSEFFGHEMEGQMQSSMMPFTLTEL
VTLSRCLRDACLGIIKLAYPETKAEHREEYMAAFRSVGVKTNTEVQRRIQAEQKRWVQLF
KVITNLVKMLKARDIRRPFCPVGHWLSEEVNIRADKVTQLYVPSARHVWRTRRMGRIGPL
QSTLDVGFEPPQLSVSEERHLAILTELPFVVPFEERVKIFQRLISVDKRDVQGDGPFPDG
INVTIRRNYIYEDAYDKLSPENEPDLKKRIRVHLLNAHGLDEAGIDGGGIFREFLNELLK
SGFNPNQGFFKTTNEGLLYPNPAAEMLVGDSFTRHYYFLGRILGKALYENMLVELPFASF
FLSKLLGTSADVDIHHLASLDPEMYRNLLFLKSYEGDVEELGLNFTVVNNDLGEAQVVEL
KPGGKDIPVTTANRIAYIHLVADYRLNKQIRPHCLAFRQGLANVVNLEWLRMFDQQEIQV
LISGAHVPICLDDLKNFTNYSGGYSANHPVIQIFWEVVEGFTDEEKRKLLKFVTSCSRPP
LLGFKELYPAFCIHNGGSDLERLPTASTCMNLLKLPEFCDQHLMRSKLLYAIESSAGFEL
S
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgagggagatttcaaaacacgacccaaggtgtcattgggaggagccagt
aaaaaggaagaaaaagcctccttgttgcatcgtacacaagaggaaagacggaaaagagag
gaagaaagaaaaaggctgaaaaacgcaatcatcattcagtcctacatacgtggctaccaa
gacctaaaacaacagtatgccattcaaagggctaagtttgatgagtctgtcagtcagtca
caggcagagggaacgcagcacgtcttggctgccactactctatgcctcctatcgagacga
cttatatttttctacagacagagcgtggatgcacatagattgatatggttatgccagaac
ctggtgaaacacaacagtcagtttgtgaagctgttgaacagtccccagaagcagacatgt
gtatttcagatcaaaagaatcctgggattctgctgcagactcctgcaaaactgcccagat
gacagtttaaatgttgctgttcccatgcggatgttagaaatcttttcttcagagagaact
tatcttattgttattccagatgctaacaatgtagcttcattacttgagcagattttgcac
tatatggtacaaaaaggatactacaagtcgctgtatagtcttgtaaatcacagactgccc
tccagtctggagtacagcgatgctccctctattcctctggcaagcacactgttggagcac
atcctcaaacctttgcactttacttactcctcctgcacaacaggcgcaaggcagtttgta
tttgcggcgtttacagaggagttcatctctgcgccgttcaccgagcagatctttcacttt
tttatcccggctctgtcggaccgtcgtctctcgttcccgttcgaggccttcctgagctcc
ctgcaggtcaccatcgactctttctcagcagcacaaagccaggcaccgtggctcttctac
tttgtcctctctgcaggagagaactgcttaggctcactatcagaggagggacacctgctc
taccttcgggctctgcaggctctgctgccgctgcttccggtgtcggaaagcaccagccgg
ccggaagtgaacagtgattcagaggatgatgatgatggtgacatgcaccctacacccatg
caggacaacagccgcatttctgtgcagttgataacggaggaatgcatccacaagctggac
acaaaacagcagactaatgccctgctgaacctggtttggagggactcggccagtgaggag
gtcttcaccatgatggcatccatttgtcacacgctcatggtgcagcatcgactcatggtg
ccaaaagtcagactcctgtacagcttagctttcaatgcacgtttcctgaggcatctgtgg
cacctgataacctccatgacaactaaaatgattaccggctcaatggtgccgctgctccaa
ctgatctctcggggttcccccatgtcatttgaagattcaaaccggatcattcccctcttt
tacctcttcagctctctcttcagtcactctcttatctcagtgcatgacagcgagttcttt
ggacatgaaatggaaggtcagatgcagtcctctatgatgcccttcactctgactgagctg
gtgactttgtcccgctgcctgagagatgcatgcctgggaatcatcaagctggcctaccct
gagactaaagcagagcacagggaggagtacatggccgccttccgcagcgtgggagtcaag
acgaacaccgaggtccagcgacgcatccaggctgagcagaagcgctgggtgcagctcttc
aaggtcatcactaacttggtgaagatgctgaaagctcgcgacatcagacgacctttctgt
ccggtgggtcactggctgtctgaggaggtcaacattcgggccgataaggtcactcagctt
tatgtcccatcagcaagacacgtgtggagaacaagaaggatggggcgcattggacctctt
cagtctacgcttgatgttggttttgagcctccgcagctctctgtgtctgaagagagacac
ctggccatcctcacagagttgccttttgttgttccatttgaggagcgagtcaagatcttc
cagaggttgatctctgtggacaaacgtgacgtgcagggggatgggcctttccctgacggc
atcaatgtcaccatcagacgcaactacatctacgaagacgcctatgataaactctcccca
gaaaatgaaccggaccttaagaagaggattcgagtccaccttctcaacgctcatggtctg
gatgaggcaggcatcgacggaggcggcatctttcgcgagttcctcaacgagcttctcaaa
tcgggcttcaatcccaaccagggctttttcaaaaccaccaacgagggtttgttgtatccg
aatcctgctgcagagatgctggtgggcgactccttcacgagacactactatttcctgggc
aggatcctcggaaaggcactctacgagaacatgctggtagaattgccctttgccagcttc
ttcctgtccaaacttctgggaaccagtgcagacgtggacatccaccaccttgcctcttta
gaccctgagatgtatcgcaaccttctgttcctcaagagctacgagggcgatgtggaagag
ctgggcctcaacttcactgtggtcaacaacgacctgggagaagctcaggtggtggaactg
aagccaggaggaaaagatatcccggtgacaacagccaaccggatagcttacatccattta
gtggctgactataggctcaacaaacagatcaggcctcactgcctggccttcagacagggt
ctggccaatgtggtcaaccttgagtggctgcgtatgtttgatcagcaggaaatccaggtg
ctgatatctggggctcatgttccgatttgtctcgatgacctgaaaaacttcacaaactat
tcaggtggatactctgctaaccaccccgttattcagatcttctgggaagtggtcgaagga
tttacagatgaagaaaaacgcaaactgttaaagtttgtcaccagctgctccagacctccg
ctgctaggctttaaggagctttatccagccttctgcattcataacggtggaagtgacctg
gagcgcctgcctacagccagcacctgcatgaacctgctcaagctcccagagttctgcgac
caacacttgatgaggagcaagctgctatatgccatcgagtcgagcgccgggttcgagctc
agctga
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