Xiphophorus hellerii (green swordtail): 116712067
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Entry
116712067 CDS
T07363
Symbol
ptchd3
Name
(RefSeq) patched domain-containing protein 3
KO
K24682
patched domain-containing protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
116712067 (ptchd3)
Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
Other domain-containing proteins
Patched domain-containing proteins
116712067 (ptchd3)
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GFIT
Motif
Pfam:
Patched
Sterol-sensing
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
116712067
NCBI-ProteinID:
XP_032407689
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Position
21:complement(20024053..20029044)
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AA seq
849 aa
AA seq
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MGCRRTDCLSRPLSNLFEKLGSTVGSYPLYFFVIPVLITASLSGGFVFLKDREDNDLERQ
FTPKKGPSKATRAFVRENFPYNTSMFSENRLYDKGNFASLIAVSKNSNNILESPAFEDIV
RLNEKILDISVDRKGLGFSQVCAIANGKCFSNIILELIGGNETGITYPEHNHRSGLVFLG
SALGGVVTDANSTIQRARAVKLYYYLNSQETAAEASKLWLREFKALLSDEMDRKNIDVSY
YTSKSKQEEIDSHTVDGFPLFLITYACAISLSVISCLRSDHVRNKMWVAVFGVLTSGLAV
VSSFGLLLYIGVPFVITVANSPFLILGIGLNNMFIMVSDWQHTHVNDPVPKRMGHTYKEA
VMSITITALTDVPKFFIGVMSDFPSVQSFCLYTATSIIFCYVYTITFFGAFMALNGRREA
SNRHWLTCMKVPSQKSANQTEMYNICCVGGSYDKFTGAEKKQPASNFFKDYYGPCLMKPW
VKGVVVFVYLAYLALSVFGCCHMQQGIELYDLAADDSHVTKFNIKDRQYFYDYGPSVMVI
VKGKLAYWDKDKRSQLQACIEDFKELHFIDRDVYTSWLDSYLSYGQEKHLNLDDKNVFLS
NLPPFFDLYPFFKQDVNQTGDAIHASRFFIQTVNITKANEEIEMLKILKSTVGRCQAASL
LVYNHEFIYFDQYDVVVKSTIKNVGVITAVMLVVSLLLIPNPVCSLLVTCSIGSVTAGVN
GFMALWDISLDSISMIVFTVCIGFTVDFSAHVSYAFVSSEKPRPEDKAVDALSSLGYPIM
QGALSTVLGVSVLSMSEFHTFRIFFKIFFLVMFIGMVHGLVFMPVFLTAGTCSSDKDEKH
EEDLKSSKF
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgggctgtagacgcacagactgcctctctcggcctctgtcgaacctttttgaaaaactt
ggctccacagttggctcctatccgctttatttcttcgtcattcctgtcttaatcacagcg
tctcttagtggggggtttgtttttctcaaagacagagaagacaatgatcttgagcgccag
tttacccccaagaaagggccctcaaaggcaacgagggcttttgtcagggagaactttccg
tacaatacctccatgttttctgagaaccgcttgtacgacaaggggaactttgcatccctc
attgctgtctcaaagaacagcaacaatattttggaaagccccgcctttgaggacatcgtc
agactaaacgagaagatcctggacatttctgtggacagaaaggggctgggattcagccag
gtgtgtgccatagccaatggaaagtgcttctcaaacatcatcctggaactcatcggtggc
aatgaaaccggcatcacctacccagaacacaatcaccggtccggtttagtcttcctgggc
tctgctcttggtggagtggtaacagatgctaacagcaccatccagagggctcgagctgtg
aagctctactactatttaaacagccaagaaactgcagccgaggcctcgaagttatggctg
agagaatttaaagctctgctgtcggacgagatggacaggaaaaacattgacgtctcttac
tacacctctaaatccaagcaggaggagatcgacagccacaccgtagatggattcccttta
ttcctcatcacttacgcctgcgctataagcttgtctgtgatatcctgcctgagatcggac
catgtcaggaacaaaatgtgggtggctgttttcggcgttttaacctctgggctggcagtc
gtctcctctttcggcttgctgctttacatcggagtgccgtttgtcataactgtggccaac
tctccttttttaatactcggaattggcctgaacaacatgttcatcatggtgtccgactgg
cagcacacccacgtgaacgaccccgtaccgaagcggatgggtcacacctacaaagaagcg
gtgatgtccatcaccatcaccgccttgacggacgtccccaagttcttcattggcgtcatg
tccgacttcccgtcagtgcagtccttctgtctgtacaccgccacctccatcatattctgc
tacgtctacaccatcaccttcttcggcgccttcatggctttaaacggcaggcgagaggct
agcaaccggcactggctaacctgcatgaaagtaccatcacagaagtcagcgaaccaaacg
gagatgtacaacatctgctgcgtgggaggcagctacgataagttcacaggagcggagaaa
aaacaaccagcgagtaatttctttaaggattactacggaccttgtttgatgaaaccgtgg
gttaaaggcgtggtagtctttgtttatctggcgtatttagctttaagcgtgtttggatgt
tgccatatgcagcagggaattgaactttatgatctggcagctgatgactctcatgttacg
aaattcaacattaaagacaggcagtatttttatgattatggcccatctgtcatggtcatt
gtaaaagggaaattggcgtactgggataaggataaaagatctcaacttcaggcatgtata
gaagactttaaagagctccacttcattgatagagacgtctacacatcttggttggactct
tacttgtcttatggtcaagagaaacatctaaaccttgatgataagaatgtttttctctca
aatctgcctccattttttgatttatatccattttttaagcaagatgtgaaccagaccgga
gatgccatccatgcgtcccggtttttcatccaaactgtgaatattaccaaagccaacgag
gaaattgaaatgctcaaaatcctcaaatctactgtaggcagatgccaggcagcgtcttta
ttggtctacaaccatgagttcatctactttgaccagtacgacgttgtggtgaagagcacc
attaaaaacgtcggggttatcacggctgtgatgttggtcgtctctctcctgctgattccc
aacccggtctgctccttgttggtcacttgttcgatcggttcagtcactgctggggtcaat
gggttcatggctctttgggacatcagtctggactccatatccatgatcgtcttcaccgtc
tgcatcggattcaccgtggacttctccgctcacgtgtcctacgcctttgtctccagtgag
aagccccgtcccgaagacaaggccgtggacgctctgtccagtctgggttaccccatcatg
caaggcgccctgtccacagttttaggggtgtcggtgttgtccatgtctgaatttcacacc
ttcaggatcttcttcaagatttttttcctggtcatgtttattgggatggttcatggcctt
gtttttatgccggtattcctgacagccggtacatgcagctcagataaagacgaaaagcat
gaggaagatttaaaatccagtaaattttga
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