KEGG   Xiphophorus hellerii (green swordtail): 116712225
Entry
116712225         CDS       T07363                                 
Name
(RefSeq) lysine-specific demethylase 5B-B-like isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
xhe  Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:xhe01009]
    116712225
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xhe03036]
    116712225
Enzymes [BR:xhe01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     116712225
Protein phosphatases and associated proteins [BR:xhe01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     116712225
Chromosome and associated proteins [BR:xhe03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    116712225
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_Pygo PHDvar_NSD PHD_UBR7-like PHD_5
Other DBs
NCBI-GeneID: 116712225
NCBI-ProteinID: XP_032408029
LinkDB
Position
1:complement(26173102..26206397)
AA seq 1542 aa
MSLPRPDEFKPPPECPVFEPSWEEFRDPYAFINKIRPIAERTGICKVRPPPDWQPPFACD
VDKLHFVPRIQRLNELEAQTRVKLNFLDQIAKFWDLQGCTLKIPHVERKILDLYKLNKLV
ADEGGFDIVCQDRRWTKIAVQMGFSPGKAVGSHLRGHYERILYPYNLFQSGANLLAQEPA
SKLMRLEADPDLEKCVQKPDQSVEKMSGEEPKLQEPIQRAPAPPPDVCPSARRAKRMKIE
TTCVKTEPGEMGDSKPNLRRRMGSIVVKQEPEKPIPILVKQEPVEFREPIIEADKFKSRY
KKMIPLIPPSPVDLVVCLVCGSGGDEERLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPK
CLAQECSKPHEAFGFEQAHRDYSLRAFGQMADAFKSDYFNMPVHMVPMELVEKEFWRLVG
AIEEDVTVEYGADIASKEFGSGFPIPNGKFKVSPADEKYLKCGWNLNNLAMMNPSVLTHV
TADICGMTLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGFAAEQLEKVMK
KLAPELFESQPDLLHQLVTIMNPNTLMAHGVPIYRTNQCAGEFVITFPRAYHSGFNQGFN
FAEAVNFCTVDWMPLGRQCVDHYRLLHRYNVFSHDEMVCNMATKAETLNVVLASAVHRDM
ALMIKEEQELRDKVKKMGVVNCKEAKYDHLQDDERQCAKCRTTCYLSAITCSCSPGVLVC
LYHINSLCSCPVSNYTLNYRYTMDDLFPMMNAVKQRAELYDEWASRVTQTLEAKLEKKKG
LPVFRSLLTESETRLFPDNDLLRRLRLVTQDAEKCASVAQQLLNGKKQTRYRCGSGKSRS
QLTVEELSSFVRQLYNLCCSLPQAPQLKELLNRIEDFQQHSEKVLVEESPSVAEIQSLLD
VSFDFDVDLPELPQLRERLEQARWLEAVQLASAQPNTLTLEAMRRLIDQGVGLAPHPSVE
KAMARLQEQLTLSEHWEDKASSLLKARPPHSIETLSAAAEKASVIPAHLPNCLLLKDTIR
KAREWLQEAEERQASGCVLMADSLSDMLLRGQAIQVQLEPLDRLESLMADGQKWKESAAA
TFLLKDSTLTLLEVLCPRFEAGAVGSPKRKAKKGKESLKNNKKKPTRLNSLSDVEKALSE
TKDSTSAMATLEELRVREMETFFNLRAANESKLLPTADCMDLKVCFCQKAPMGAMLQCEL
CRDAFHSVCVRDPAESRETQPWLCPHCHRSEKPPLSKVLSLLASLHGVGVRLPEGDALNY
LVERTLNWQHRTQQILQTCNLPELEERPETPPTLTHWVSGCDNTHNNTQAPCLTPEWNRT
SHTQTVFYTEQRCIPLQGLNCELEELMVEGLLLQVSLPQVQSLYHILLDRANSQHSNRAA
SPAEEEPSEHSKHMQFISQGTNMALNEDGSDDTTDAMTASERKAKRRLERDGLPDAESRG
KDKKHSHKRQKVNKKKLQHRPASTSSSPRSDFSQSDDSDEEMAVCPAESCLLPEGDEVDW
VQCDGRCNQWFHQVCVGVTAETAEKEDYVCVACSLNDRQTRK
NT seq 4629 nt   +upstreamnt  +downstreamnt
atgagcctgcctcggccggacgagttcaagcctcccccggagtgcccggtcttcgagccc
agctgggaagaatttcgagatccttatgctttcatcaacaagatccggcccatcgcagag
aggacggggatctgcaaagtccggccgccgccagactggcagccaccatttgcctgcgat
gttgacaagcttcactttgtccctcgcatccagcggctcaatgagctggaggcacagacg
agggtcaagctcaattttttggaccagattgccaaattttgggatttgcagggatgtacc
ctgaagatccctcatgtggagaggaagatcttggacttatataagctaaacaagcttgtt
gcagatgaggggggatttgacatcgtctgccaggacaggcggtggaccaagatcgcagtt
caaatgggcttctctcccggcaaagccgtcggctcacacctgcgagggcattacgaaaga
atcctctatccttacaatctgtttcagagtggagctaacctgctggcacaagaaccagct
tccaaactgatgcgtttggaggctgatcctgaccttgaaaagtgtgtccagaaacccgac
cagtcagtcgagaagatgagcggcgaagagcccaagctgcaggagccgattcagagagcg
ccggcccccccgcctgatgtttgcccaagcgctcgccgagccaagcgcatgaagatcgag
actacctgtgtgaagactgagccaggtgagatgggggatagcaagcccaatctgaggagg
aggatgggctctattgtcgtaaagcaagaaccagaaaaaccgattcccattctagtgaaa
caggaaccagtcgagtttagggaaccaataatcgaagcagacaaattcaagtcccgctac
aagaagatgattcctctcattcctccgagtccagtggatctggtagtgtgtctggtgtgt
gggagtggcggcgacgaggaacggctgctgctgtgtgacggctgtgacgacagctaccac
accttctgtctgatccccccgctgcacgacgtccccaaaggagactggaggtgccccaag
tgtctggctcaggaatgcagcaaacctcacgaggcgttcgggtttgaacaggcacacagg
gactattctctgcgtgcgttcggccaaatggcagatgcattcaaatctgactacttcaac
atgccggttcatatggtacccatggagctggtggagaaagagttctggcgcctggttgga
gccatcgaggaggacgttaccgtggagtatggagctgatatcgcctccaaggagtttgga
agcggattccccatcccaaatggaaaatttaaggtttccccagcagatgagaaatacctc
aaatgtggctggaatctgaacaatctggcgatgatgaacccatcggttctgactcatgtg
actgctgacatctgcgggatgacgctgccctggctttatgttggcatgtgcttctcctcg
ttctgctggcacattgaggatcactggagctactccatcaactacctgcactggggcgaa
ccgaagacctggtacggtgctcctggttttgctgccgagcagctggagaaggtgatgaag
aaactggctccagagctgtttgagtcccagccggacctgctgcaccaactggtcaccatc
atgaaccccaacactctgatggcgcacggcgtcccgatttacagaaccaaccagtgtgcc
ggtgagttcgtcatcacgtttcccagagcgtatcacagcggctttaatcagggctttaac
tttgctgaggcggtcaacttctgcaccgtggactggatgcccctgggcaggcagtgtgtg
gatcactatcgtctgctgcatcggtacaacgtcttctcccacgatgagatggtgtgcaac
atggccaccaaagcagagactctcaacgtggttctggcctcggccgttcacagggacatg
gccctcatgatcaaagaggagcaggaactgagggacaaagtcaagaaaatgggggtggtg
aactgcaaggaggcaaaatatgatcacctccaagatgatgagcgtcagtgtgccaagtgc
aggaccacctgctacctttccgccatcacctgctcctgcagcccaggtgtgctggtctgt
ctctaccacatcaatagcctctgctcctgccccgtctccaactacactctcaactacaga
tacactatggatgacctgttccccatgatgaacgccgtgaagcagcgagccgagctctat
gatgaatgggcctctcgtgtcactcagactctggaggccaaactggagaagaaaaaaggt
ctgcccgtctttcgctctcttctcactgagtcagagaccagactgttccccgacaacgac
ctgctgcggcggctgcggctcgtcacacaagacgcagagaaatgcgcctcggtggctcag
cagctgttgaacggcaagaagcagaccaggtatcggtgtggaagtggaaaatctcgcagc
cagctaacagtggaagagctcagctcctttgtgaggcagctgtacaacttgtgctgcagc
ctcccgcaggcacctcagctcaaggaactcttgaatcggattgaagacttccagcagcac
agcgagaaagtcctggtggaggagtctcccagcgtcgcagagatccagagcctcttggac
gtcagctttgattttgatgtggacctgccggagctgccgcagctccgggagcggctggag
caggccaggtggctggaggccgtgcagctggccagcgcccagcccaacacgctcaccttg
gaggccatgaggagactcattgaccagggagtcggcttagcaccgcatccgtccgtggag
aaagccatggcgcgcctccaggagcagctcaccctgtcggagcactgggaggacaaggcg
agcagcctgctgaaggccaggccgcctcactccatagagactctgagcgctgctgctgaa
aaggcctccgtcatcccagctcacctcccaaactgtctgctgctgaaggacaccatcagg
aaagcacgggagtggcttcaagaagccgaggagcgtcaggccagcggctgcgttttgatg
gcggacagcctctccgacatgctgctacgaggacaagccatccaagtgcaactggagccg
ttggaccggctggagtctctgatggcagacgggcagaagtggaaagaatctgcagccgca
actttccttctaaaggactcaactcttacattgctggaggtcctgtgtccaagatttgaa
gctggagctgtcggttctccgaagaggaaggccaagaaggggaaagaatctctgaaaaat
aacaaaaagaaacccacacgactgaactctctcagcgatgtggagaaagctctttcagag
accaaggactctacctctgcaatggcgactctggaggagctgcgcgtgagggagatggaa
accttcttcaatctcagggcggcgaacgagtcgaagctcctccccacagcggactgcatg
gacctgaaggtgtgtttctgccagaaggcgcccatgggagccatgctgcagtgcgagctc
tgccgggacgccttccacagcgtgtgtgtcagggacccggccgagtcgcgcgaaactcag
ccgtggctctgtccgcactgccaccggtccgagaagcccccgctaagcaaggtcctctcc
ctgctggcgtccctgcacggcgtaggcgtgcgtctgccggagggcgatgccctgaactat
ctggtagagagaactcttaactggcagcaccgaacgcagcagattttacagacgtgtaac
ctgccggagttagaggagagaccggaaacacctccaacactaacccactgggtgtcgggc
tgcgacaacacccacaacaacactcaggctccatgtttgactccagagtggaacaggaca
agccacactcagaccgtcttttacaccgagcagagatgcatcccactgcagggcctgaac
tgtgagctagaggagctgatggtggaggggctcctgctgcaggtgtcgctgccgcaggtc
caaagcctgtaccacatcctactggaccgagccaacagccagcactccaacagagccgct
tcgccggccgaggaggagccgtcagaacacagcaaacacatgcagttcatctctcaggga
acaaatatggcactgaacgaggacgggagcgacgacacaacggacgccatgacggcctca
gaaaggaaggcgaagaggcgtctggagagggacggtttaccggacgcagagagcaggggg
aaagataaaaaacactcccacaaaagacagaaggtgaataaaaagaagctgcagcaccgg
ccggcttctacctcgtcctcaccgcgctccgacttctcccagtccgacgactctgacgaa
gaaatggccgtgtgtcccgctgagagctgtctgctgcccgaaggagacgaggtggactgg
gtccagtgtgacggcagatgcaaccagtggttccaccaagtctgcgtcggcgtcacggcg
gagacggccgagaaggaggactacgtttgcgtcgcgtgttcgctgaacgatcgacagacg
agaaagtga

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