Xiphophorus hellerii (green swordtail): 116712379
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Entry
116712379 CDS
T07363
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xhe04054
]
116712379
Pattern recognition receptors [BR:
xhe04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
116712379
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
TIR_2
LRR_14
LRR_1
LRR_9
LRR_6
LRR_NXF1-5
DUF3725
Motif
Other DBs
NCBI-GeneID:
116712379
NCBI-ProteinID:
XP_032408143
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Position
21:complement(20432690..20439661)
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AA seq
958 aa
AA seq
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MGPEDVARAKRHSRCSKGNVIFLLMFLICSAVPASGFSLKSCSLSKTIAVCVQRRLTAIP
QDIPPTVTGFDLSVNRLTKIRSSDFTPLPLLVYLELNRNKILHIESAAFASLTSLQKLNL
NNNKVIKLEERAFDGLSNLTELRINHNQIKIVSSTSFQSLRKLKVLDISHNKLKQTTDVQ
LILQHMPQLQELVLKGNSLKAFHSWELTNNSLNLCRLDLTFNPLEDFRITADIFQNLTCL
KIGNPNGNKPMRWNLKNHTFLSTVSSLDITGLIMSLDDMKELFKAVNSSLIFLRMNSMKR
NQSQLINISCSIPTMSKLHFRRNKLKMIHSDLFKSCVHLTELDLADNSIEIIQENAFSAL
KGLRILGLSRNKLSSVPNATRNLQNLSELDLDSNAIRSITCQDFSNKTMLKELSMKNNSI
PALNKCAFKDLLRLQVLRLQSNQIAHLNGSFENNLPNLKRLYLNGNKLTKILPKEFRSLR
SLLNLSLHQNQIKDFHKDSFVGLTNLTDVCLQTNSIKREALKSGVFNALINLRRLDLSSN
HIKYYDSHPLTYPPFSNLSRLEELSIIGQHSSGKSCLPANFLQGLNNLLSFYAKRIHIIY
IDKDTFKYTPKLETLDLGSNDLRTLSSELFAPIQNLKNLYIHRTGLQSLDFFIDASLTKL
EFLEGRHNQYSVITEDVIKSLPSLLCVDFTYISFSCDCDNAWFLNWTIANTQTQVNDAYN
YSCNYPDDFKGKKLLGFDFTSCLQDKGFICFVSTTCMVLFVMVMSFSYHFMRSQLYIAYY
LFWAWLFDSKYKNKQAPHQYDAFISYNSSDEPWVIGELLPKLEGEQGWRLCLHHRDFEPG
KPIIDNITDAIYSSRKTICVISRRYLRSEWCSREVQTASFRLFDEQKDVLILVFLEDIPT
YLLSPFHRMRKLLKKQTYLSWPRAAGHPEVFWENLRKALQTGNDANEEKLQLTVTETY
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgggaccagaggacgtagctagagcaaaaagacattcaagatgttccaaaggcaacgtg
attttcctcttgatgtttctgatctgttctgctgttcctgccagtggattttcactgaag
agctgcagcctgagcaagactatagctgtatgtgtgcagaggcgactgactgctattcct
caggatattcctccgaccgttaccggctttgacctttctgtaaacaggttgacaaagata
cgatcttcagatttcacacccttacctcttctagtgtacttggaactgaatcgcaataag
attttacatatcgaaagcgctgcttttgcctctctgacttccctccaaaagttaaatctt
aacaacaataaagttattaaactagaggaaagagcttttgatgggttgagcaacctcact
gagttacgaattaatcataaccagataaaaattgtgtcatccacatctttccagtctttg
aggaaattaaaagttttggatatttcacacaacaaactgaaacagaccacagatgttcaa
ctcatactgcagcatatgccacagctacaagagttggtgcttaaaggaaatagtttaaaa
gcctttcattcatgggaacttaccaacaactcactcaatctttgcagacttgatttgact
tttaatcctttggaagactttaggatcactgctgacatcttccaaaatctcacctgtctg
aagatcggcaatcctaacggaaacaaaccaatgaggtggaatctgaaaaaccacactttc
ttgagcacagtgtccagtcttgacatcactgggctgattatgtctcttgatgatatgaaa
gaattatttaaagctgtaaactcatcgctcatctttctgcggatgaacagcatgaaacga
aaccaaagtcaactcatcaacatttcctgctccatcccaacaatgtctaaattgcatttt
cgacgcaataagctcaagatgatccattcagatttgttcaaatcatgtgtccatctgact
gagttagatttagcagataattctatagaaattatccaagaaaatgccttctcagcgcta
aaaggtttaaggattttgggtctgagtagaaataaactttcatctgttccaaacgcaacg
aggaatctacaaaatctttctgagcttgatctagacagcaacgcgatccgctcaatcaca
tgtcaagatttctccaataagacgatgctgaaggaactaagcatgaagaataactcaatc
ccagctctgaacaaatgtgccttcaaggatttgctacgactgcaagttctcagattacaa
tccaaccagatagcacatttaaatggatcttttgaaaataatcttccaaaccttaaacgt
ctgtatttgaatggaaataaacttactaaaattttaccaaaggaatttaggagcttgcgg
tctctccttaacttatcgttacatcaaaatcaaataaaggactttcataaagacagtttt
gttggactgacaaatctcactgatgtctgcttgcagacaaacagtatcaaaagagaggcc
ttaaagtcaggtgttttcaatgctctgattaatctaagaagattggatctatcttctaat
cacattaaatattatgacagtcaccctctgacatatccaccattttctaatctgtcccgt
ttggaggagttgtctattattggtcagcactcttctggaaagtcctgtctgcctgcaaat
ttcctgcaaggtttaaacaacttgctgagtttctatgccaaaagaattcatattatctac
attgataaagacacatttaaatacaccccaaagctagaaactcttgatcttgggtcaaat
gatttgaggactctgtcttcagaactgtttgccccaattcaaaaccttaaaaacctctac
atacaccgaacaggtcttcagtcgttagatttcttcatagatgccagtctgaccaagctg
gagttcctggagggaagacacaaccaatactcagtcatcactgaagacgtaatcaagtcg
cttccatcgctcctgtgtgttgactttacatatatcagtttctcctgtgactgtgacaat
gcctggttccttaactggacgatagcaaatacacaaacacaggttaatgatgcgtataac
tactcttgcaactatccagatgacttcaaaggcaaaaagctcttgggtttcgacttcaca
tcctgcttacaggataagggtttcatctgttttgtgtccacaacatgcatggttctcttt
gtcatggttatgtccttcagctaccatttcatgaggtcccaactttacattgcctactac
cttttctgggcttggctctttgactcaaagtacaaaaataagcaagctcctcatcagtac
gacgcctttatctcctacaactccagtgatgagccttgggtgattggtgaactgttaccc
aaactggaaggagagcagggctggaggctgtgtctgcaccatcgagactttgaaccaggg
aagcccatcatagacaacatcacagatgccatctatagcagcaggaagacgatctgtgtg
atcagccgcagatatctcaggagcgagtggtgctccagggaggtccagacggccagtttc
cgtctctttgacgagcagaaggatgtgctgatcctggtgtttttggaggacattcccacc
tacctgctgtctcctttccaccgaatgaggaagctgctgaagaagcagacttacctgagc
tggccgcgcgccgccggccacccagaggtattctgggaaaacctgaggaaggctctgcag
accggaaacgatgcaaatgaggagaaattacagctcactgtgacagaaacgtactga
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