Xiphophorus hellerii (green swordtail): 116712380
Help
Entry
116712380 CDS
T07363
Symbol
pou6f2
Name
(RefSeq) POU domain, class 6, transcription factor 2 isoform X1
KO
K09368
POU domain transcription factor, class 6
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116712380 (pou6f2)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
116712380 (pou6f2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
FtsX_ECD
HOCHOB
HD-ZIP_N
FAM176
Motif
Other DBs
NCBI-GeneID:
116712380
NCBI-ProteinID:
XP_032408145
LinkDB
All DBs
Position
21:17561609..17653678
Genome browser
AA seq
663 aa
AA seq
DB search
MITGQLSKPLLSLRSDMSVAELRADDKAATPDSDLNDEPLLLPSEATDREGTPSKLYGVR
DGSVQSDASSSPSEQSHLGQSHPGYPMGPQSLLVAQQLANAVGGVMSGAAPGMNQPILIP
FNAGGHLGGQQGLVLSLPTANIQSLVAAAAAGGIMTLPLQNLQATSSLNSQLQHLQQLQQ
MQQHHHQQQQQQQQQQQQQHHHHQQTHSHTQNQLPTQHHMTPPSQQHTSVPSPGSTCSST
SGHPQQSPPHRPNQSPARSLPSPVTPPIPLPLNPLASQAAVAAAAAMGSIAGSQVFGNTL
SNLQGATGQLVTNAQGQIIGTIPLMPNSAGPSSQSGGGNPALQVQPITPQLLTNAQGQII
ATVIGNQILPVINTQGITLSPIKPGQQLPQAQQGQTGPVSSQANLLHMPHRQSPLHQASS
SSSTSSSSSALSVGQLVSNPQTAPSEVDGVNLEEIREFAKAFKIRRLSLGLTQTQVGQAL
SAAEGPAYSQSAICRHTILRSHFFLPQEAQENTIGSSLTGKLNPGLLYPARFEKLDITPK
SAQKIKPVLERWMAEAEARHRSGMQNLTEFIGSEPSKKRKRRTSFTPQALEILNSHFEKN
THPSGQEMTEIAEKLNYDREVVRVWFCNKRQALKNTIKRLKQPDLGMAAPMDPLTDSLEE
LPK
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgattacagggcagctgagcaagccgctgctctccctgcgcagcgacatgagcgtggca
gaactccgggcggacgacaaagcggccaccccagacagcgatttgaacgacgagcccctg
cttctgccctctgaggccacggacagagagggcactcccagcaagctgtacggagttcgt
gacggatcagttcagtctgacgccagcagcagtccgtctgagcagagtcatctgggccag
tctcatccaggatacccaatgggcccacagtctctcctggtggcccagcaactggccaat
gcagtgggtggcgtgatgtccggggcggcgccaggcatgaaccagcccatcctcatccct
ttcaacgcaggcggacacctcggcggacagcagggcctggtgctttccctgcccacggcc
aacatccagagcctggtggctgctgccgctgcagggggaatcatgacgctccccctccag
aacctgcaagctacctcatcactgaactcccagctccagcacctgcagcagctccagcag
atgcagcagcatcaccaccagcagcagcagcaacaacaacagcagcagcagcagcagcac
catcatcaccaacagacccactcccacacccagaaccagctgccaacccagcatcacatg
accccacccagccagcagcacacctctgtaccatctccaggttccacctgctcctccacc
tctggacacccgcagcagtccccgccacaccggccgaaccagtcgccggctcgcagcctt
ccctcccccgtcactcctcccataccgctgccgctgaaccccctggctagccaggcagcg
gtggcagcagcagccgccatggggtccatcgctggctctcaggtgtttggcaacaccctc
tcaaacctgcaaggagccaccgggcagcttgtcacaaacgcacaaggacagataattgga
acaatcccactgatgcccaactctgcagggccctccagccaatcagggggtggcaaccca
gcactgcaggtacagccaattacgcctcagcttctgaccaacgctcaaggccagatcatc
gccacggtgatcggcaatcagatcctgcctgtcatcaacacccagggaatcacgctgtca
ccaatcaagcccggacagcagctgcctcaggctcagcagggtcagacgggccctgtgtcg
tctcaagccaacctgctccacatgccccacagacagagtcctctgcaccaggcctcttcc
tcctcctccacctcttcatcttcctcggctctcagcgtggggcagctggtcagcaacccg
cagactgcccccagtgaggtggatggggtcaacctggaggagatccgcgagttcgccaaa
gcattcaaaatccgccggctgtctctgggcctgacgcagacccaggtgggccaggcgctc
agcgcggccgaggggccggcgtacagccagtccgccatctgcagacacaccatcctgaga
agccactttttcctaccacaggaagcccaagagaacactataggtagcagtctgacaggc
aaactgaaccctggccttttatatcctgccaggtttgagaagttggacatcacccctaaa
agcgcccagaagattaagcctgttctggagcgctggatggccgaggctgaagcccgccac
cgatccggcatgcagaacctgactgagtttattgggagcgagccctcgaaaaaacgcaag
cggcggacctctttcaccccgcaggcgctggagatcctcaacagccactttgagaagaac
acgcacccctccggacaggaaatgacggagatagccgagaagctgaactatgacagggag
gtggtgcgtgtgtggttctgcaacaagaggcaagccctgaaaaacacaataaagcgcttg
aaacagcccgacctcggcatggccgcgccaatggacccgctcaccgactctctagaggag
ctccccaagtga
DBGET
integrated database retrieval system
