Xiphophorus hellerii (green swordtail): 116712385
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Entry
116712385 CDS
T07363
Symbol
puf60
Name
(RefSeq) poly(U)-binding-splicing factor PUF60 isoform X1
KO
K12838
poly(U)-binding-splicing factor PUF60
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116712385 (puf60)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xhe03041
]
116712385 (puf60)
Spliceosome [BR:
xhe03041
]
Complex A
U2 snRNP components
U2 related factors
116712385 (puf60)
Complex B
116712385 (puf60)
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
116712385
NCBI-ProteinID:
XP_032408151
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Position
21:complement(18206621..18225011)
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AA seq
540 aa
AA seq
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MAVTNTAGGEALTMENGQGTGSKLGLPPLTPEQQEALQRAKKYAMEQSIKSVLVKQTIAH
QQQQLTNLQMAAVTMGFGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFA
PFGPIKSIDMSWDSVTMKHKGFAFVEYDVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQ
AQPIIDQLAEEARAYNRIYVASVHPDLSDDDIKSVFEAFGRIKSCTLARDPTSGRHRGFG
FIEYEKPQSALDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPTTPGGLPPAAAVAAAAAT
AKITAQASINPFQRDLMAFQEAVAGASVLGALAAPQLLGQQIGLPQAVMAAQAPGVITGV
TPVRPPIPVIPQVGLVNPVLASPPVLSNQAGGSNQQEKKEEKEETLQDGTGQEMLSDQEH
MSISGSSARHMVMQKLLRKSESTVMVLRNMVGPEDIDDDLEGEVTEECGKFGTVNRVIIY
QEKQGEEEDADIIVKIFVEFSAASEMNKAIQALNDRWFGGRKVVAEVYDQDRFNSSDLSA
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcggttacgaacactgcgggaggtgaagctctgacgatggagaatggacaaggcaca
ggctccaagcttggcctaccgcctcttaccccagagcagcaggaggcactacaaagggcg
aagaagtatgccatggaacaaagcattaagagtgtgttggtgaagcagaccattgcacat
cagcagcagcagctcaccaatctgcagatggcagcagtgacaatgggctttggagatcct
ctctcacctttacaatcggtggcagctcagcggcaacgtgcgctagcgatcatgtgtcgg
gtgtacgtgggctccatatactatgagctcggagaggataccatcagacaagcctttgcc
cccttcggtccgatcaagagcattgacatgtcttgggattcggttacaatgaagcataag
ggcttcgcctttgtggagtacgacgtgccagaagctgctcagctagctctggaacagatg
aactcggtcatgttaggagggcgaaacattaaggttgggcggccaagtaacatcggtcag
gcgcaacccatcatcgaccagctggcagaggaggcacgtgcctacaaccggatctacgta
gcgtcagtccacccggacctgtcggacgacgacatcaagagcgtgtttgaggccttcgga
aggattaaatcgtgcacgttagctagagaccccacatcagggcgacacaggggctttggc
ttcattgagtatgaaaagcctcagtcagccctggatgcggtgtcctctatgaatcttttt
gacctgggtggtcagtacttgcgagtcggcaaagcagtgactccaccgatgccgctattg
acccccacaaccccgggtgggctgccacctgctgcggctgtagctgcagcggcagctacg
gctaagataacggcccaggcaagtataaatcccttccaaagggatttaatggccttccag
gaggcggtagctggcgcgtcagttttgggggcgttggcagcaccacagcttcttggacag
cagataggattacctcaggctgttatggctgcacaggcaccaggtgttatcacaggtgtg
actccagttcgtcctcccatacccgtgattccccaagttggtctagtgaacccggtgctc
gcatcaccgcctgtgctgtctaaccaagccggcggctcgaaccaacaggagaagaaggag
gagaaagaggagacgcttcaggatggcacaggccaggagatgctaagtgaccaggagcac
atgagcatctcggggagcagtgccaggcacatggtgatgcagaagttgctcagaaaatcc
gagtccacggtgatggtgcttcgaaacatggttggaccagaggacatcgacgacgacctg
gagggcgaggtgacggaggagtgcgggaagtttggcaccgtcaacagagtcatcatctac
caggagaagcaaggagaggaggaagacgcagacatcatagtcaaaatctttgtagagttt
tccgccgcctccgagatgaacaaagctatccaagccctgaacgaccgctggttcggaggc
cgtaaagttgttgcagaggtgtatgaccaagaccgttttaacagcagtgacctttcagca
taa
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