Xiphophorus hellerii (green swordtail): 116712528
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Entry
116712528 CDS
T07363
Symbol
nrxn1
Name
(RefSeq) neurexin-1 isoform X1
KO
K07377
neurexin
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116712528 (nrxn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116712528 (nrxn1)
Membrane trafficking [BR:
xhe04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
116712528 (nrxn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
116712528
NCBI-ProteinID:
XP_032408194
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All DBs
Position
22:complement(11828557..12110031)
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AA seq
1503 aa
AA seq
DB search
MFVQKLHSAHFIWVGILICCFMEIGTCLEFTGTEGQWARFPVWNACCESEMSFNMKTKSS
HGVLVYFDDEGFCDFLELLLINGKLSLRYSIFCAEPATVVSDTAVNDSQWHNVTIRRSFK
NTTLSVDGEIKWVEAKSKRRDMTVFSHLFIGGIPPELRSVALRLTSAAVKDQPPFAGWIT
DINVNNTESEMINSEGVLMDVCGTANMCLNGGVCSLINSEPTCDCSHTGFQGKDCSEEDN
NTEGLAHLMMGDQGKSKGQRGETWHVRSLLSIQGKEEYVATFKGSEFFCYDLSLNPIQSS
SDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFND
NEWHDVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTAD
LPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAKQDDPKMKIHGTVAFKCENVATLDPITF
ETPESYIILNKWNAKKTGSISFDFRTTEPNGLLLFSHGKSKQQPKDSKTPQTLKVDFFAI
EMLDGHLYLLLDMGSGTTKTKAVNKKVNDGEWYHVDFQRDGRSGTISINTLRTAYTAPGE
SEILDLDDNLYLGGLPENKMGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDVRRLAEIQ
KAAGVKPSCSKEPPKQCLSNPCQNNGVCREGWNRYVCDCSGTGYLGRSCEREATILSYDG
SKFMKVQLPVVMHTEAEDVSLRFRSQRAYGLLIATTSRESADALRLELESGRVRLTVNLD
CIRINCTSSKGPETIFAGQNLNDNEWHTVRVFRRGKSLKLTVDELPPVEGQMAGDHTQLE
FHNIETGIVTEKRFMSMVPSNFIGHLQSLSFNGMAYIDLCKNGDIDYCELNAMIGFKNII
ADPVTFKSRSSYVTLTTLQAYYSMHLFFQFKTTSPDGLILYNSGDGNDFIVVELVKGYLH
YVSDLGNGAHLIKGNSNKPLSDNQWHNVIISRDTNNLHTVKIDTKVTTQTTSGAKNLDLK
GNLYIGGVAKEMYKDLPKLVHAKEGFQGCLASVDLNGRLPDLMSDALDCVGQIERGCEGP
STTCQEDSCANQGVCLQQWEGFSCDCSMTTFGGPLCNDAGTTYIFGRDGGLITYTWPPND
RPSTRADRLAIGFSTHLKDAVLVRVDSSSGLGDFLKLHIEKGNIAVVFNVGTDDINIEET
SKFVNDGKYHIVKFTRSGGNATLQVDDLPVIERYPTGNIDNERLALARQRIPYRLGRVVD
EWLLDKGRQLTIFNSQTTIQIGGWERDRSRSFQGQLSGLYYNGLKVFNMAAEGDPNIKIQ
GSVRLVGESPSSITPQSSTTANRSETSTSIMEITTTTASTRRIKQTTPREPQQTTDDLMV
ASAECPSDDEDIDPCEPSSGGLASPTGSGPKGYPGTSEVFRESSSTTGMVVGIVAAAALC
ILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGTVVKEKPINNPKTSSKNKKNKDKE
YYV
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtacaaaagctgcacagtgcccatttcatatgggttggaatcctcatatgctgc
ttcatggaaataggcacctgtctagaatttacaggtactgagggacagtgggctaggttt
ccagtgtggaatgcatgttgtgaaagtgaaatgagcttcaacatgaaaacaaagagctcc
cacggggttcttgtttactttgacgacgagggattttgtgactttttagaacttctccta
ataaacggcaaactcagccttcgctactcaatcttctgcgcagaacctgcaactgtggtg
tctgacactgcggtcaacgacagccaatggcacaacgtcacgattaggagaagctttaag
aacacaaccctttctgtggatggcgagataaagtgggtagaagcgaagtcgaaaagacga
gacatgactgtcttcagccatttgttcattggtggaataccgccggagctaaggtctgtg
gcgttgcgcttgacgtctgcagcggttaaggatcagccaccttttgcaggatggataaca
gatataaatgtcaacaacacggagtctgaaatgatcaacagcgagggggtcttaatggat
gtctgtgggacagccaacatgtgcttaaatggaggagtttgcagtttaattaacagtgaa
ccgacatgtgactgctctcacactggcttccaaggaaaggactgcagtgaagaagacaac
aataccgaaggtctggcacacctgatgatgggcgaccaaggtaaaagtaaagggcagaga
ggggagacttggcatgtaaggtccctactgagcatacaaggaaaagaagagtatgttgca
accttcaaaggatctgagttcttctgctacgacttgtccttgaaccctattcaaagcagc
agtgatgaaatcacgttgtcattcaaaaccctacagaggaatggactaatgctgcacacg
ggcaaatctgctgattacgtcaacctggcgctgaaaaatggggctgtgtcactcgtcatt
aatttggggtctggagcctttgaagctcttgtggagccagtcaatgggaaatttaatgac
aatgagtggcatgatgtcaaagttacaaggaatctacgtcagcactcaggcattggacac
gctatggtaaccatatccgtagacgggattctgaccactacaggatacacccaggaagac
tataccatgctaggctcagacgactttttctatgttggaggaagcccgagtacagcagac
cttcctggatctccagttagcaacaacttcatgggttgcctcaaggaggttgtttataaa
aacaacgatgtgaggcttgagttgtctaggctggctaagcaggatgaccccaagatgaaa
atccatggcactgtggcctttaagtgtgagaatgtagccactttggaccccatcacattt
gaaacacccgagtcgtatattattctcaacaaatggaacgccaaaaagactgggtccatc
tcctttgactttcgcaccaccgaacccaacggccttctacttttcagtcatggcaagtcc
aaacaacaaccaaaggactccaagacaccccaaactcttaaagtggacttcttcgccatt
gagatgctggacggccatctgtacttgctgttagatatgggctctggaaccacgaagacc
aaagcagtcaataaaaaagtcaatgatggtgaatggtaccatgtggacttccagcgagat
ggaagatcaggtactatctctatcaatacccttcgtactgcttacacagcccctggagaa
agtgagatcttggacttggatgacaatctgtaccttgggggtctgccagagaacaagatg
ggcctcgtgttccccactgaggtgtggacagcattgctcaactatggctatgtgggctgc
attcgagatttatttatcgatggacagagtaaggatgtgcgacgtcttgcagagatccag
aaggctgctggggtcaaaccctcatgctctaaagagcctcctaagcagtgcttgagcaac
ccctgccaaaacaatggggtctgcagagagggctggaaccgctatgtctgcgactgctct
ggaactggatacttgggacgctcctgtgaaagagaggcgaccattctcagttacgatggc
agtaagtttatgaaagtccagctcccagtggtgatgcacaccgaagccgaagacgtgtct
cttcgattccgctcccaacgggcgtatggcctgctaatagccaccacatcccgggaatct
gctgacgccctgcgtctggagctggagagtggtcgtgtccgtcttaccgtcaatttagat
tgtatcaggattaactgtacctccagcaaaggcccagagacaatttttgcgggtcagaac
ctgaacgataatgagtggcataccgtacgtgtgttcaggagaggcaagagtttgaaactg
acggtagatgaactaccgcctgtggaaggtcaaatggcaggtgaccacacccagctggaa
tttcataacattgagacgggcattgtgacagagaagcgcttcatgtccatggtgccctcc
aacttcattggccacctccaaagcctctccttcaatggcatggcttacattgacctctgc
aaaaatggtgacattgattattgcgaactcaatgccatgattggcttcaagaacatcatt
gctgatccagttaccttcaagtcacggtccagctatgtgaccctcaccactctgcaggcc
tactactccatgcaccttttctttcagtttaaaaccacatctcctgatggtctcattctc
tacaacagtggcgatggaaatgacttcattgtggtggaactggtcaaaggttatcttcac
tatgtgtctgacctggggaatggagcccacctcatcaaaggcaactcaaataaaccccta
agtgacaaccagtggcataatgtcatcatctcccgggacaccaacaatctgcacacagtc
aagattgacaccaaggttaccacacagacaacctcaggagccaagaaccttgacctgaag
ggaaacctttacattggtggggtggctaaggagatgtataaggaccttcccaaactggtg
catgccaaggagggtttccagggttgcctggcatcagtggacctgaatggacgcctccca
gacttgatgtcagatgctctggactgtgtgggacaaatagagagaggatgtgaaggccca
agcactacgtgccaagaggactcgtgtgccaaccagggtgtgtgtcttcagcagtgggag
ggcttcagctgtgactgcagcatgacaacatttggaggaccactttgtaatgacgcggga
acaacatacatatttggccgagatggtggactgatcacctacacatggccgccaaatgac
cgacccagcacaagggcggaccgactcgccattgggttcagcacacacctgaaggatgct
gtcttggtgagggtggatagctcctctggactcggagacttcttgaagctccacattgaa
aaaggaaacattgctgtagtatttaatgtgggaacagatgacataaacatcgaggagaca
tcaaagtttgtaaatgatggaaagtaccatatagtgaagtttacaaggagtgggggtaat
gccactctgcaggtggatgacctgccagtcattgagcgctaccctacaggcaacattgat
aacgaacgcctggcgcttgctagacagcgaatcccataccgactcggtcgagtagttgac
gaatggctactcgacaaagggcgacagcttacaatcttcaacagccaaactactatacaa
attgggggctgggagcgagatcggagtcgatcctttcagggccagctctcaggtctctac
tacaatggcctaaaggtgttcaacatggctgccgagggcgatcccaatataaagatccag
ggcagcgttcggctggttggggagtctccctcctctatcacgcctcagtcgagcaccaca
gccaaccgctcggaaacatccacatccatcatggaaatcaccaccaccaccgcatctacc
aggagaattaaacagaccacaccgcgggaacctcagcagacaactgatgacttgatggtg
gcttcagcggagtgtccaagtgatgatgaagacattgatccctgtgagccgagctcaggt
gggttagccagtcccacaggatctggaccgaagggttacccgggcacgtcggaggtcttc
cgggagtccagcagcacaacggggatggtggttggcattgtagcagcagctgccctgtgt
atactcatcctcctttatgctatgtacaagtaccgtaacagagatgagggatcgtatcac
gtggatgagagtcgcaactacatcagcaactcagcacaatccaatggcacagtagtcaaa
gagaaacccatcaacaacccgaaaacctccagcaagaacaagaagaacaaggacaaagag
tactacgtgtga
DBGET
integrated database retrieval system