Xiphophorus hellerii (green swordtail): 116712573
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Entry
116712573 CDS
T07363
Name
(RefSeq) cadherin-1-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04371
Apelin signaling pathway
xhe04514
Cell adhesion molecules
xhe04520
Adherens junction
xhe05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
116712573
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116712573
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
116712573
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
116712573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116712573
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116712573
04090 CD molecules [BR:
xhe04090
]
116712573
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
116712573
Cell adhesion molecules [BR:
xhe04515
]
Cadherins
Major cadherins
116712573
CD molecules [BR:
xhe04090
]
Proteins
116712573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
Big_9
Motif
Other DBs
NCBI-GeneID:
116712573
NCBI-ProteinID:
XP_032408267
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Position
22:complement(26542753..26556209)
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AA seq
803 aa
AA seq
DB search
METTWFVVWSVWILCQTSAAADGSSCEPGFESELFILKVSRKNLKPGTRLSKVGFTDCTT
RTRFLFSTDDSRLVVETEGIITVKRQVVLHEGNQNFSVHAWDSQGQKMTLPVRLLYQDHH
YMNNRLDAEYHHEAHKLSNQLHDHLDSDSNQQIPILDFPKSNPGLKRRKRGWVIPPINVP
EHSRGPFPLFLVVIRSDEDKVKTIYYSITGPGADQPPVGLFTMNRDTGHLHVTQELDREK
VDKYTLQAHSVAEGGDGKAEEPMEIIINVIDQNDNKPVFSQSVYVGEVPEASQEGFQVIQ
VVATDADEPNTDNSDIRYHVMSQKPEEPSPNMFTINPATGVIRVNEAGLDREKIPQYTLE
VQAADNKGEGLTGFTKVIIKVTDLNDHTPIFIQPFYNATVEENKVDALVVKMLVKDGDEP
HTMAWNAKFSIIDGDPGNLFTVETGTNKQEGIISTAKGLDFETTSKHTLLVTVENEAPFA
VPLVTSTATVVVTVEDVNEPLMFDPKEKHVSKSEDLAENSTVVRYTATDPDVGRKQKVMY
EIISDPAGWFDIDKETGEIKVRNQMDRESPLVKEDKYSALIGAYDDDQIPATATGTLVLH
LQDVNDSPPTIEERKFTVCSKIPVPQLLTVTDRDGPGFTSPYNVSLVGSAKANWTARMIS
TRTGIILTLNRELEIGDYTVAMSIADSQGLSQVSTVTARVCDCTGEDVSCREKDVGGSNS
PVILGILKAIVVLLIMLGLPLFLFVRRRRAEEKPVELKDLSTADNMLEEEERNDREDIQG
GGSDSQDPEYEYLAEGEPLSETV
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacttggtttgtagtttggagtgtttggatcttgtgtcagacctcagctgct
gcagatgggtcatcgtgtgaacctggatttgagtcggagctgtttatattaaaagtgagc
agaaagaacctgaagccaggcacaagactgagcaaagttggcttcactgactgcacgacc
cgcacaagatttctcttcagcacagatgacagccgtttagttgtagagactgagggaata
ataactgtaaagagacaggttgtccttcatgaggggaaccagaacttctcggtccatgcc
tgggattcacaaggtcagaaaatgactcttcctgtcaggttgctgtatcaagatcatcac
tatatgaacaaccgtctggatgctgaatatcatcatgaggctcacaaactcagcaaccag
cttcatgatcacctggactctgatagtaatcagcagattcccatcctggatttccccaaa
tctaatccagggctgaagaggagaaagagaggctgggttatccctcctattaatgttcct
gaacatagcagaggaccttttcctctgtttcttgtcgtgattcgctctgatgaagataaa
gtgaagacgatctattacagcatcactggtccaggagcagatcagcctcctgttggtctt
ttcaccatgaacagagacactggtcatctgcatgtcacacaggaactggacagagagaaa
gtggacaagtacacgcttcaagcccattctgtggcagagggaggcgatggaaaagcagag
gagccgatggaaattataatcaatgtaattgaccagaatgacaacaaacctgttttcagt
cagtctgtctatgtgggagaagttccagaggcctcacaagaaggttttcaggtgattcag
gttgtggccacagatgctgatgagccaaatactgacaactctgatatcaggtaccatgta
atgagtcagaagccagaggagcccagtcccaacatgtttaccatcaatccagcaactgga
gtcatcagagtcaacgaagctggactggaccgagagaaaatccctcagtacacactggaa
gtacaggcagctgacaacaagggagaaggtttgactggatttaccaaagtgattatcaaa
gtgaccgacctcaacgatcacactccaatctttatacagcccttttataacgctacagtt
gaagagaataaagtagacgctctagttgttaagatgttggtgaaggacggtgatgagcct
cataccatggcctggaatgcaaagttcagcatcattgatggagatccaggaaatctgttt
actgtggaaacaggaacaaacaaacaagaaggaatcatcagtactgctaagggtctggac
tttgagacaaccagtaagcacactctactggtcacagtggagaatgaggctccttttgct
gtccccttggtcacttccactgctacagtggtggtgactgtggaggatgtcaatgaacct
ctgatgtttgatccaaaagagaagcatgtttctaaaagtgaggatcttgctgagaacagc
actgtggtgcgatacacagctactgatccagacgttggacgcaaacagaaagtcatgtat
gaaataattagtgacccagctggctggtttgacattgataaggagactggtgagataaaa
gtgagaaaccaaatggacagagaatctccacttgtcaaggaggataaatactcagccctg
attggtgcatatgatgatgatcaaatcccagctacagcaactggaactctggttcttcat
cttcaggatgtcaacgacagcccccctaccattgaggaacgcaaattcacagtgtgtagc
aagataccagttcctcagctgctgactgtgacagacagagatggaccaggctttacttct
ccatacaacgtcagcctagttggctctgcgaaggctaactggactgctaggatgatcagc
accagaacaggaattatcctgactttaaaccgtgagctggagattggagattacactgtg
gccatgagcattgcagacagccagggtctgtctcaggtcagcacagtcacagccagagtg
tgtgactgcactggagaagacgtgagctgtcgggagaaagatgttggtggctccaactct
ccagtcatcctgggaatactgaaggccatcgtggtgctgctgatcatgctggggctgcca
ttgttcctgtttgtgagacgaaggagagcagaggagaaacctgttgaactcaaagatctc
agcacggcagacaacatgttggaggaggaggagaggaacgacagagaggacattcaggga
ggcggttctgactcgcaagacccggaatatgaatatctggctgaaggggaaccactttca
gaaactgtctga
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