Xiphophorus hellerii (green swordtail): 116712576
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Entry
116712576 CDS
T07363
Name
(RefSeq) B-cadherin-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04371
Apelin signaling pathway
xhe04514
Cell adhesion molecules
xhe04520
Adherens junction
xhe05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
116712576
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116712576
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
116712576
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
116712576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116712576
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116712576
04090 CD molecules [BR:
xhe04090
]
116712576
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
116712576
Cell adhesion molecules [BR:
xhe04515
]
Cadherins
Major cadherins
116712576
CD molecules [BR:
xhe04090
]
Proteins
116712576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_4
Big_9
Motif
Other DBs
NCBI-GeneID:
116712576
NCBI-ProteinID:
XP_032408268
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Position
22:26655737..26674321
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AA seq
778 aa
AA seq
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MGTAWFAVLGVLFVIFQVNGQVVLHEGHRKLEMDSATKQDDPGLKITKRGWIIPPLSVSE
NQRGPYPLFLAQIRSDFDKVKKIQYKITGPGANEFPVGLFTMDRDSGHLYVTQELDREKQ
DKYMLYAHAKEAGGGTDAEQPMEIIINVIDQNDNKPVFNQSTYKGEVPEASTKGFEVIQV
VATDADEPNTDNSDIRYRIMSQKPEEPSPNMFTINPATGVIRVNEAGLDREKVPKYELEV
MVADNKGEGLTGFTKVIIKVMDSNDHAPVFTESRYEATVEENKVDALVVKMLVKDGDEPH
SMAWNAKFSIIDGDPGNLFTVETGTNKQEGIISTAKGLDFERTSKHTLLVTVENEAPFAV
PLVTSTATVVVTVEDVNEPPIFDPKEKHVSKREDLAENSTVVRYIATDPDVGRKQKVMYK
ILDDPAGWLVIDKGTGEIKVRNKMDREDNAVKENKYTALIGAYDDDDQIPATGTGTLIIT
LEDVNDNPPSVDDRLVKMCNKRPVSQLLSVTDKDGPGFTFPYSVVLLDSAKTNWTARMND
NKTGIVLTLTRELESGTYKVGMKVSDNQGLFQINTIEAEVCDCTGEEVRCIEKVIAGSSM
PVILGILGGVLLLLMLVLLLLLLANKNKPKKGQPLLLDNDIRDDIFCYDEEGGGEEDQDY
FDLGVLHRGLDNRPHVFRDEVAPVFQTRPVVYKPRPANPEDIGGFIDDNLKAADNDPTAP
PYDSLLVFDYEGGGSEAGSISSLNLSSDGDQDYDCLSDWGPRFKKLADMYGGGDDDMM
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggggaccgcctggtttgcggttttgggagttttattcgtcattttccaggtaaacgga
caagttgtccttcatgagggtcaccgaaagcttgagatggactctgccactaaacaggat
gatccaggactgaagattacgaagagaggctggattatccctcctcttagtgtttctgag
aatcagagaggaccttatcccctgtttcttgctcagattcgctctgatttcgataaagtg
aagaagatccagtacaaaatcactggtcctggagctaatgagtttcctgttggtcttttc
accatggatagagacagtggtcatctgtatgtcacacaggaactggacagagagaaacag
gacaagtacatgctttatgcccatgctaaggaagctggaggtggtacagatgcagagcaa
cctatggaaattataatcaatgttattgaccagaatgacaacaaacctgttttcaatcag
tctacctataagggagaagttccagaggcttcgacaaaaggttttgaggtgattcaggtt
gtggccacagatgctgatgagccaaatactgacaactctgatatcaggtaccgtataatg
agtcagaagccagaggagcccagtcccaacatgtttaccatcaatccagcaactggagtc
atcagagtcaacgaagctggactggaccgagagaaagtcccaaagtatgaactggaagta
atggtagctgacaacaaaggagaaggtttgactggatttaccaaagtgattatcaaagtg
atggacagcaacgatcacgctccagtctttacagagtccagatatgaggccacagttgaa
gagaataaagtagacgctctagttgttaagatgttggtgaaggacggtgatgagcctcat
agcatggcctggaatgcaaagttcagcatcattgatggagatccaggaaatctgtttact
gtggaaacaggaacaaacaaacaagaaggaatcatcagtactgctaagggtctggacttt
gagagaaccagtaagcacactctactggtcacagtggagaatgaggctccttttgctgtc
cccttggtcacttccactgctacagtggtggtgactgtggaggatgtcaatgaacctccc
atctttgatcctaaagagaagcatgtttccaaacgtgaggatcttgctgagaacagcact
gtggtgcgatacatagctactgatccagacgttggacgcaaacagaaagtcatgtataaa
atactcgatgacccagctggctggcttgtcattgataagggtactggtgagataaaagtg
agaaacaaaatggacagagaagataatgctgtcaaagagaataaatacacagcattgatt
ggtgcatatgatgatgatgatcagatcccagctacaggaactggaactctgatcattaca
cttgaggacgtcaacgacaaccccccctccgttgacgatcgtttagttaaaatgtgtaac
aagaggccagtttctcagctgctaagtgtaacagataaagatggaccaggctttactttt
ccatacagcgtcgtcttactggactctgctaagactaactggaccgctaggatgaacgac
aacaaaactggtattgttctgactttgacacgtgagctggagagtggaacttacaaagtg
ggcatgaaggtttcagacaaccagggcctgtttcagatcaacacaatcgaagctgaagtg
tgtgactgcactggagaagaagtgaggtgcatagagaaagttattgctggctccagcatg
ccagtcatcctgggaatactcggtggcgtcctcctgctacttatgctggtcctgctgctg
ctactgttggcaaataaaaacaagccaaagaagggacaacctttgctcctagataacgac
atcagagacgacatcttttgttatgatgaggagggaggcggagaggaggaccaggactac
tttgatctgggtgttctccaccgtggtttggacaaccgtccccatgtgttcagggatgaa
gtggctccagtttttcagacacggcctgttgtgtataaacctcgacccgccaacccagaa
gatatcggcggcttcattgatgataacctaaaggcggcagataacgacccgactgctccc
ccctacgactccctgctggtgtttgattatgaaggaggcggttctgaagctggaagcatt
tcgtctctgaacttgtcaagcgatggagatcaggactatgactgcctcagcgactggggg
cctcgcttcaagaaactggccgacatgtacggaggaggagatgatgacatgatgtga
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