Xiphophorus hellerii (green swordtail): 116712856
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Entry
116712856 CDS
T07363
Name
(RefSeq) attractin-like protein 1 isoform X1
KO
K24332
attractin
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
xhe04091
]
116712856
Lectins [BR:
xhe04091
]
C-Type lectins
Others
116712856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_1
Kelch_3
Kelch_4
Kelch_5
Kelch_6
EGF_LMN_ATRN
CUB
EGF_TEN
PSI
Kelch_2
NANM
EGF_Teneurin
EGF_laminin
EGF_2
TMEM100
Motif
Other DBs
NCBI-GeneID:
116712856
NCBI-ProteinID:
XP_032408587
LinkDB
All DBs
Position
22:27738838..27930593
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AA seq
1308 aa
AA seq
DB search
MDPAGCKHLPAWARSSSGLWKTYLGLLVLLHLVLHAGASSAPCDKSCFSGKCVNGSCVCD
HGWVGDQCQHCQGRFKLTDLSGSLSDGPVNYKYKTKCTWLIEGYPNAALRLRFNHFATEC
SWDHMYVYDGDSIYAPLIAVFSGLVVPEAKGKESVPEVVTTSGYALLHFFSDAAYNLTGF
NIAYSINSCPNNCSGHGRCIAGNSVAGRVYCECDEYWKGEACAVPYCRDDCGSPDHGYCD
LTGEKLCVCNDSWQGPDCTISVPSMGAFWMLPSIKPSTQSLGRASHRALVHSGLMWVVGG
YSFNYSNYHMMLNYNPDTSAWDVIPASNGPLYRYGHSLAIYQDCIYMFGGKLETGPANIT
DELWLFNVPTRSWLPLKPASAPLYALKGHTAHVVILPNGDPVMLVFFGYSSIYSYINKVQ
EYNIRSNLWQVVSVGGAMVQGGYGHSSVYDQAGGCVYVHGGYTALSHNKYGLVDHMYRYS
VATRTWLILRESGLPRYLHSAVLLSGTMLVFGGNTHNDTSLSNGAKCFSADFLAYDIACD
KWTVLPRPGLHRDVNRFGHSAVVSNGSMYVFGGFSGLLLNDVLAYNPPSCQAFSSPTLCS
AAGPGVRCLWVKSRCLPWESKQHDHIVPASFCPARPDSTDEQCIRFSDCASCTANTRGCQ
WCEDRKCISASSNCTVLTLELAQQHGGALSLSPPPSMLSEHQLSLWKHGARRRGHSVRDS
SRCKRREEQECFRLANCRSCSLNSNCQWEVQQQECQVLPGQLCGDGWYHVGDVCLRINSS
RESYDNAQHYCKNLGGNIASLLTDNQVGFVLEELHKYELENQRLSPWVGLRKINVSYWGW
EDASPFTNSTLQWLPGEPSDSGFCAFLERTESAGLKANPCTATTDGLICETAAGSLQSQN
ARPCKTPCALRTSCANCTSQAMECMWCGSTQRCVDSSAYVISFPYGQCMEWQTQECSAQN
CLGHRTCTECLERVECGWCGDPSNTGRGVCMEGSYRGPLKPSSTRSGSRLRDRDMVVDQS
LCSSDRGYNWAFIECPACQCNGHSRCVNSSVCEHCGNLTAGTHCQTCIPGYYGDPTNGGK
CNVCKCNNHANLCHVSSGKCFCTTKGIKGDQCQLCDSENRYLGNPLRGTCYYNLLIDYQF
TFSLLQEDDRHYTAINFMATPEQANKNLDMSINASNNFNLNITWSFSSTAGTISGEEMSV
IARMNIKEHRDSFSCEKFNFRLHHNITFYVYVSNFSWPIKIQIAFSQHNSIMDLVQFFVT
FFSCFLSLLLVAAVVWKIKQTCWASRRREVGHAHSCVLPVCVGLSNCV
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atggatcccgctggatgtaaacatctacccgcctgggccaggtcatcatctgggctgtgg
aaaacatatctgggattactggtgctgcttcatctggtgcttcacgccggggcttcgtcg
gcgccctgcgataagagctgtttttcagggaagtgtgtcaacgggagctgcgtgtgtgac
cacggctgggtcggggatcagtgtcagcactgccagggaagattcaagttaacggacctg
tcaggttctctctcagatggtccagttaactataagtacaagaccaaatgcacttggcta
attgaaggataccctaatgcagcgctccggctgcgcttcaatcactttgccacagagtgc
agctgggaccacatgtatgtctacgacggcgactccatttatgctcccttgattgctgtg
ttcagtggtttggtggtgccggaggctaaagggaaggagtcggtacccgaggtggtgacg
acgtccgggtatgccctgctccacttcttcagcgacgccgcgtacaacctgactggtttc
aacatcgcctactcgataaactcctgtcccaacaactgttcgggccacggccgttgcatc
gcggggaattcagtggcgggccgcgtatattgcgaatgtgacgagtactggaaaggcgag
gcctgcgccgttccctactgcagggatgactgtggcagcccggaccacggctactgcgac
ctgaccggagaaaagctctgcgtctgcaacgacagctggcaaggtcctgactgcaccatc
tctgtcccctccatgggggccttctggatgctgcccagcatcaaaccgtcgactcagtcc
ctgggccgggcctcccaccgagccctggtgcattctgggttgatgtgggtggtgggaggc
tactccttcaactactctaactaccacatgatgctcaactacaacccggacaccagcgcg
tgggacgtgatccccgccagcaatggacccctctacagatatggacactctctggctatc
taccaggattgtatttatatgttcggtggaaagctggagacaggccctgctaacatcaca
gacgagttgtggttgttcaatgtccccactcgtagctggttgccactgaaaccagcttca
gcacctctttacgccctgaagggccatacggctcacgtggtgatcctgcccaacggcgac
ccagtgatgctggtgttcttcggctactcgtccatctacagctacatcaacaaagttcag
gagtacaacatcaggtcgaacttgtggcaggttgtgtctgtcggaggtgccatggttcag
ggaggttacggccacagcagcgtgtatgaccaggccggtggctgtgtgtatgtccatggg
ggatacacggcgctgagccacaataaatacggccttgtggaccacatgtaccgctacagc
gttgccaccagaacatggttgattctcagggagagcgggttgccgcggtacctccactcg
gcggtgctgttgagtggcacaatgctggtgtttggaggaaacactcacaatgacacatct
ctaagcaatggagccaagtgcttttctgctgacttcttggcatatgatatagcttgcgat
aaatggacagtccttcctagaccaggactccacagagatgtcaaccgcttcggacactct
gctgtggtcagcaatggctccatgtacgtcttcggaggcttttcgggtctgcttctgaat
gacgtgctggcctataaccctccgtcctgccaagccttctcgtccccaactctgtgttcg
gcggctgggccgggagttcgctgcctctgggtgaaaagcagatgtctcccatgggagtcc
aaacagcacgatcacatcgtcccggcttctttctgccctgcacgacccgacagcacagac
gaacagtgcattcgcttctcagactgcgccagctgcacagccaacacccggggctgccag
tggtgtgaggacaggaagtgcatctccgcctcgagcaactgcaccgtgctgactttggaa
ctggcccagcagcacggcggcgctctgtctctgtctccacctccatccatgttgtctgaa
catcagctcagcttgtggaagcatggcgcgcgaaggaggggacattcagtgagagactcg
tccaggtgcaagcgacgggaggagcaggagtgtttccgactggccaactgccggagctgc
tccctgaacagtaactgtcagtgggaggtgcagcagcaggagtgccaggtgctgcccggg
cagctttgtggggatggctggtaccacgtcggggacgtctgcctgaggatcaactccagc
agagagagctacgataacgcacagcactactgcaaaaacctgggaggaaatatagcctct
ctgctcacagacaaccaagttggttttgttctggaggagctacacaagtatgagctcgaa
aatcagaggttatctccatgggtgggcctgcggaaaatcaacgtgtcctattggggctgg
gaggacgcgtccccattcaccaacagcactcttcagtggttgccaggggagcccagtgat
tcaggtttttgcgcctttttggagagaacggagtcagccggacttaaagccaatccctgc
accgccaccactgacggcctgatctgtgaaacagctgctgggagtctgcagagtcaaaac
gctcgtccctgcaagacgccatgcgccctgcggaccagctgcgccaactgcaccagccag
gccatggagtgcatgtggtgtgggagcacccagcggtgcgtggactcctcggcgtacgtc
atctctttcccgtatggccagtgtatggagtggcagacccaggaatgttctgctcagaac
tgtttgggtcacaggacctgcaccgagtgcctggagagagtcgagtgcggctggtgtggc
gaccccagcaacaccggcagaggcgtgtgcatggaaggttcctatcgcgggcccctgaag
ccttcaagcaccaggtctggatccagactgcgggacagggacatggtggtagatcagagc
ctctgctcttcggacagaggctacaattgggcctttatcgagtgtcctgcgtgtcaatgt
aacggccacagcaggtgtgtgaacagcagtgtgtgtgagcactgtgggaacctgacagca
gggactcactgtcagacctgcatccctggttactatggagaccccaccaatggagggaag
tgtaacgtttgtaagtgtaacaaccacgccaatttgtgccacgtcagctctggaaaatgc
ttctgtaccacaaagggcatcaagggagaccagtgtcagctatgcgactcagagaaccga
taccttggtaaccctctccgtggaacctgctactacaacctgctgatcgactaccagttt
actttcagcctgcttcaggaggatgaccgccactacaccgccatcaactttatggccaca
ccagaacaggctaacaaaaacctggacatgtccattaacgcctccaacaacttcaaccta
aacatcacctggtccttcagctcaacagctggtaccatatctggtgaggagatgtctgtc
atagcgaggatgaacatcaaggagcacagggacagcttctcatgtgaaaagtttaacttc
aggcttcaccacaacatcaccttttacgtctacgtgtccaacttcagctggccaatcaag
atccagatcgctttctcccagcacaacagcatcatggacctggtgcagttcttcgttacc
ttcttcagctgtttcctgtcgttgctgctggttgctgctgtggtttggaaaattaagcag
acctgttgggcttcccggcgtagagaggtaggtcacgcccattcctgtgtgttaccagtc
tgtgttggattgtcgaactgtgtgtag
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