Xiphophorus hellerii (green swordtail): 116712968
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Entry
116712968 CDS
T07363
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03010
Ribosome
xhe04120
Ubiquitin mediated proteolysis
xhe04137
Mitophagy - animal
xhe04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
116712968
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116712968
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116712968
04137 Mitophagy - animal
116712968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
xhe03011
]
116712968
04121 Ubiquitin system [BR:
xhe04121
]
116712968
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xhe04147
]
116712968
Ribosome [BR:
xhe03011
]
Ribosomal proteins
Eukaryotes
Small subunit
116712968
Archaea
116712968
Ubiquitin system [BR:
xhe04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
116712968
Exosome [BR:
xhe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116712968
Exosomal proteins of colorectal cancer cells
116712968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Dsc3_N
TBK1_ULD
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
116712968
NCBI-ProteinID:
XP_032408768
LinkDB
All DBs
Position
22:1333663..1336470
Genome browser
AA seq
156 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRE
CPADECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcagattttcgtgaaaaccctcacggggaaaactataaccctcgaggttgaaccttca
gatactattgaaaatgtcaaggctaagatccaggacaaggaaggaatccctcctgaccag
cagaggctgatctttgctgggaagcagctggaggacggacggacgctgtcggactacaac
atccagaaggagtccactctgcacctggtgctgcggctgagaggcggcgccaagaagagg
aagaagaagtcctacaccacacccaagaagaacaaacacaagaggaagaaggtcaagctg
gccgtgctcaagtactacaaggtggatgagaacggtaagatccaccgtctgcggcgcgag
tgtccggctgacgagtgcggcgccggcgtcttcatggcgagtcacttcgaccgccattac
tgcggcaaatgctgcctgacctactgcttcaacaagccggaggacaagtag
DBGET
integrated database retrieval system
