Xiphophorus hellerii (green swordtail): 116713068
Help
Entry
116713068 CDS
T07363
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1-like isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116713068
Membrane trafficking [BR:
xhe04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
116713068
Small GTPases and associated proteins
Rab associated proteins
116713068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
PDZ
DUF6990
Motif
Other DBs
NCBI-GeneID:
116713068
NCBI-ProteinID:
XP_032408880
LinkDB
All DBs
Position
22:7129066..7227278
Genome browser
AA seq
1510 aa
AA seq
DB search
MFASVGPRGGPRPPAAPAIPEPDLSHLTAEERDIIMSVLARQREEEAKDEAMLKEEKPIQ
ARTVNLVRQTKPPPQNDVRGIQQQLSSYRETVIRQATAAAGSAVHRDDAPTCGICHKTKF
ADGCGNLCSYCQTKFCARCGGRVSLRSNTEDKVLAPCSLFCGQRQPTVGEASCSLVIWVC
NNCRKQQEILTKPGDWFTGPPGKPSGLGSAVSEPSVCQVSLDKLRSRSQAPTGSTGTIQD
RASTLGTAPGTDARSLSEPPRDRRNGRGGSGTGRGERRSGHPRLQTQVSMDRDLRGERKE
GWQLSKGRSLEHDPVGGGASVRRTGEGGYQQVGNSGGPLRQAEPFPSGGRGQAVPGRGTG
SATGEVGDTTRPGQRTVGGTPAVSQKAPPPELRVPSVSGPETGLSPGAGVKRTKRDKAES
MLRNDSLSSDQSESLRPPPPRPYKSKRGLGSGGKRQTSVSSSEEEGGTTPEYSSCDDAEI
ESISERGDWECNPHDPTGWHHPVTWQPSKEGDHLIGRITLSKRSATMPKEAGALLGLKVV
GGRVTESGRLGAFITKVKKGSLADVVGHLRAGDEVLQWNGKLLPGATMKEVYNIILESQA
EPQVELVVSRPIGVYRKYHDIPRIPDTSHPPLESTGSSSFESQKMERPSLNVLSPSSPGM
LRDAPQLMPGQLSVKLWYDKVGHQLIVNVLQAAELPLRPDGRPRSSYVKMYFLPDRSDKS
KRRTKTMKKTCEPKWNQTFAYTHVHRRDFRNHMLELTVWDQPRSPEEDSTFMGEILIELE
TALLDDKPHWYPLQTHDVSSIPLPRPSPFLPRRHTDAPGKKLQRSQRVTEPEFDEHTAVV
SKAADGRGRERQREPSSTLEVPNQQRTPSHHIRSRSVSPHREEQGRTIRSRAPNVPTQRS
LDDELPHSRRSRSPNRYGDNSRGRRQGEEYLDDSEVILIHQSMRGKSAECLHTSDLQPSL
DRVKSASANCLTPDNHAPSPETERKSFSQSLPRRRPASPRILIQHASPEDDRIWMLLPSQ
ETLIQLSTKKRQPRTLEAPECQTLGRKRSDSGRGHLHGGASLSSAAAASAARRVRQLPQL
PPQSSSVDQALVAEERVRQLQMRVHSNRVSAATTSSQQDLDRALKNKRELYKDQRRSSEN
VSHKSSDSDVSDVSAISRTSSASRISSTSYMSIQSERPRGRFSRAIRASGRHMLKSTSVS
GEIYGMEHADGSQSDTALGSLGSGIKKRRSSLSQRVVAILPSRRSRSTSQLSPTEAAGKA
ADRQKEAPTGKKVSKAGSSTIQRSVETGMAVEFPRGGSAMNRQASRESTDGSMNSYSSEG
NLIFSGMRLGADSQFSDFLDGLGPGQLVGRQTLATPAMGDVQIGLMDKKGQLEVEVIRAR
GLTSKPGSKSLPAPYVKVYLLENGTCKAKKKTKIARKTLEPLYQQHLLFEESPQGKVLQV
IVWGDYGRLDHKCFMGVAQILLEELDLSSTVIGWYKLFPPSSLVDPTLAPLTRLASQTSL
DSGPPPGVRS
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcctcggtgggccctcggggcggcccgcgcccacccgccgctccggccatcccg
gagccggacctcagccatctgacggcggaggagagagacatcatcatgtctgtgctggct
cggcagcgggaggaggaagctaaggatgaggccatgttaaaggaggagaagccgattcaa
gcgaggacagtgaacctggtccgacagacgaagcctccaccgcaaaatgacgtccgaggt
atccagcagcagctctccagctaccgggagacagtgatccggcaggccacggcggcggcg
ggctcagccgttcatcgggacgacgcgccaacctgcggcatctgccacaagaccaagttt
gcggatggttgcgggaacctgtgctcgtactgccagaccaagttctgcgctcgctgtggg
ggaagagtgtccctgcggtccaatacggaggacaaagtgttggctccatgttccttattt
tgtggccaaaggcagcccacagtgggagaggcaagctgctctctggtgatatgggtgtgc
aataactgcagaaagcagcaggagatccttaccaagccaggcgactggttcactggtccc
ccagggaagccctccggtctcggttctgctgtcagcgagccgtctgtgtgccaagtgtct
ctggataaactgagatctcgctcccaggcacccacaggctcaacagggacaattcaagac
cgagcgagtacgctggggaccgcgccggggacagacgctcggtcacttagtgagccacct
cgggacaggagaaatggacgcggaggcagtgggacgggtcggggggagcggcggtcaggc
catccgaggctgcagacccaggtctccatggaccgggaccttcgaggggagcgcaaggaa
ggctggcagctgtcaaaggggcggtctctggagcacgaccctgtgggaggaggcgccagc
gttagaaggacaggggagggcggttatcagcaggtgggcaacagcgggggtccccttcga
caagcggagcctttcccttcaggaggcaggggtcaggctgtgccgggtcgaggcacgggg
agcgctacaggcgaggtcggggacactactcgacctggacagaggacggtgggcgggaca
ccggccgtttcacagaaagcccctcctcctgaactcagagtaccttcagtttcgggacct
gaaacgggtctcagcccgggtgccggggtgaaacggaccaagcgagacaaggctgaaagc
atgctgcgcaatgattcgctaagctccgaccagtccgaatctttgcggccgcctccgcca
cgaccctacaagtccaaacgagggctggggtccggggggaagagacaaacttctgtcagc
agttcggaggaggaaggtggaactacaccagagtacagcagctgcgacgacgctgagatc
gaaagcataagcgagagaggagactgggagtgcaatccacatgaccccacagggtggcat
catcctgtaacctggcagccatccaaagagggagaccatctaattggacgaatcaccctc
agcaagagaagtgctaccatgcctaaggaggctggggctttgctcgggctaaaggtggta
ggagggagggtcactgagtcagggagattaggtgccttcatcaccaaagtcaagaagggc
agcctggccgacgttgtgggacatctccgagcaggggatgaagttttgcagtggaacggg
aagctgttgccaggggcgaccatgaaggaagtttataacatcatcctggagtctcaagcc
gaacctcaggtggagctggtggtgtccaggcctattggggtttatagaaaatatcatgat
atcccaagaatccccgacacgtcccaccctccattagaatccacaggttccagttctttt
gagtcccagaagatggagagaccatctttaaatgtcctgtctccctccagtcctgggatg
ctccgagatgctcctcagctgatgccagggcagctatcggtgaagctgtggtacgacaaa
gtaggtcaccagctaatagtcaacgtgctgcaggctgcggagcttcctcttcgtcccgac
ggacgccccaggagttcttatgtaaagatgtacttcctccctgaccgcagtgacaaaagc
aaacgaaggacgaaaacaatgaagaagacctgcgagcccaagtggaaccagaccttcgcc
tacacccacgtccatcgcagggatttccgcaaccacatgctggagctgacggtgtgggac
caacccaggtcacctgaggaggacagcacctttatgggagagatcttgattgagctggag
acggccttacttgacgacaagcctcactggtatcccctccaaacccacgacgtctcatcg
atcccactcccccggccgtcccccttcctgccccgacgacacacagacgcacctggcaag
aagctgcagcgttctcagcgtgtaacagagcctgagtttgatgagcatacagcagtagtc
tctaaagcagcagacgggcgtggtagagagagacaacgggagccctcgtctaccctggag
gttcctaatcagcagcgaacgccttcccatcacatccgctcccgctccgtttccccgcac
cgcgaggagcaggggcgcaccatccgctcccgagcccccaacgtgcccacccagaggagt
ttggacgacgagcttcctcactctcgccgctcccgttctccaaaccgctacggcgacaac
tccagaggccgccgtcagggggaagagtacctggatgacagtgaggtcatcttgatccac
cagtcaatgcgaggcaaaagtgctgagtgcctgcacacgagtgatctccagccatctctg
gacagggttaagagtgctagcgccaactgtctcactccagacaatcatgccccctcacca
gagactgaaagaaaatctttctcccaatccctgcctcgaagacgtccagcgagtcccagg
attcttatccaacatgcttcccctgaagatgacagaatatggatgctacttccctctcaa
gagactttaattcaactcagtacaaagaagaggcagcctcggaccctggaagcccctgaa
tgtcagactcttggcaggaagcggtctgacagcggcaggggccatttgcacggtggtgca
tctctttcctcggcggcggcagcctcggcggcacggagagtgaggcagctgccacagctt
ccaccccagagcagctctgtagatcaagccctggtagcagaggagcgtgttcgtcagctc
cagatgagggttcattctaaccgggtttcagctgccaccacctcaagccaacaggacctg
gaccgagccctcaagaacaaacgagagctctacaaggaccagaggaggagcagtgaaaat
gtatcccataagtcctcagacagtgatgtcagtgacgtgtcagccatctctcgaaccagc
agtgcctctcgcatcagtagcaccagctacatgtccatccagtcagagagaccccgggga
cgtttcagtcgagctattcgtgcatcgggccgccacatgctgaagagcaccagcgtgagc
ggtgagatctacggcatggagcacgccgacggtagccagtcggacacggccctggggagt
ctgggcagcgggatcaagaaacggcgctccagtctgagccaacgggtcgttgccatcctg
ccgtcgagacggagccggagtacttcacagctcagcccgacagaggcagcgggtaaggcg
gcggacagacagaaagaggcgccgacggggaagaaggtcagcaaggcgggcagcagcacc
atccagaggagcgtggagacggggatggcggtggagtttccccgaggaggatcagccatg
aaccgccaggccagcagggagtccactgatggcagcatgaacagctacagttctgagggg
aatttgatcttctcagggatgcgattgggagccgacagccagttcagcgacttcctggac
ggattgggtcccggtcagctggttggccgccaaacgctggcaacacctgcaatgggtgat
gttcagatcgggttgatggataagaaaggtcagctggaggtcgaggtgatcagggcgcga
ggccttacctctaaaccgggctccaagtccctcccagctccttatgtcaaggtctacctg
ctggaaaacggaacatgtaaagccaaaaagaaaaccaagattgcacgcaagaccctggag
ccgctctaccagcagcacttgctctttgaagaaagtcctcagggcaaagtgcttcaggtg
atagtgtggggcgactatggacgattggaccacaaatgtttcatgggtgtagcacagatc
ctgctggaggagctggacctctcaagcacggtgattggctggtacaaactgtttccaccg
tcctcactggtggaccctacattagctccgctcacgcggctggcgtctcagacgtcgctg
gactcaggaccaccgcccggcgttcggtcctag
DBGET
integrated database retrieval system
