Xiphophorus hellerii (green swordtail): 116713084 Help Entry 116713084         CDS       T07363                                  Symbol msh6 Name (RefSeq) DNA mismatch repair protein Msh6   KO K08737   DNA mismatch repair protein MSH6 Organism xhe  Xiphophorus hellerii (green swordtail) Pathway xhe03430   Mismatch repair Brite KEGG Orthology (KO) [BR:xhe00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     116713084 (msh6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:xhe03400]     116713084 (msh6) DNA repair and recombination proteins [BR:xhe03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      116713084 (msh6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II PspAA Motif Other DBs NCBI-GeneID:  116713084 NCBI-ProteinID:  XP_032408921 LinkDB All DBs Position 22:11554340..11562033 Genome browser AA seq 1374 aa AA seqDB search MAKQSSLFNFFTKSPPPVSKPKQSSSPAEADLPGSVEKSNSSPKEEARQTQSNQQQQQPS KNTKVKQSKTASGGFQKLFGDKAATTENSSKCSFGAGALMWAKLEGHPWWPCMVVPQPLT GQQMRGKGRDQRIHVHFFDEPPTRGWVSTKYIREYQGSDSSDVKPGGVFFSSKPVIRRAM ELADKSFFDSPEKRLKMPVCRDPSDEEEEEEMELDKSTVSAEEVSDMDEKKSKGVKSPKV SRRSSRSSAEQGGKPKRRRIIVASDSDGSDEEFKPEQAASTSEEEEEEATVSSEEEEKES SQESEADSPIKPVKRKRPADNSVIKKAKTPATPSAGPKRAPKTITSDAKSRLSAFSAPDS FESQANGSGPAGGATTWDHEKLEWLQDGRRKDGKRRRQSEDDYDPTTLYVPEDFLNRNTP GMRRWWQLKSGMFDTVIFYKVGKFYELYHMDAVIGVNELGLTFMKGTWAHSGFPEIGFAR FSDVLVQKGYKVARVEQTETPEMMEARCKTMAKPTKFDRVVRREVCRIITRGTQTYSVLD GAPSETQSKFLLSLKEKAEDESSGRHRTYGVCFADTSVGYFHIGQFSDDRHCSRLRTLIA HFPPAEVLFEKSNPSAETRKILKASLSSALQEGLNAGTQFWDAQKTLKTLSEENYFEETA GDGFLPALLRRMTSESDSLCLSPKEGYELALSALGGCIFYLKKCLVDKELLSMANFEEYV PVDVELEKAAGPASFFSQTRQRMVLDGVTLANLEIFQNGSGGTEGTLLERLDSCSTPFGK RLLKQWLCAPLCNPASIRDRLDAMDDLIAAQAQAADVSELLKKLPDLERLLSKIHSIGTP LKGQDHPDSRAVLYEEVTYSKRKIADFLSALEGFKTMQEIISAFTPASGDIRSTLLRQIV SLKTEEDGLFPDLSAELKRWETAFDHQKARTTGVITPKTGFDPEFDQAFAGIKTCERDLQ DYLERQKKRLGCKNMAYWGTGRNRFQMEVPDSVSERNIPEEYEVKSTKKGWKRYVTKESE RLFSELQGFEEKRDAALKDCMRRLFYNFDKNYRDWRTAVECMAVLDVLLALSRYSLGGDG PMARPQVVLPEDNDRSTPFINLTGSRHPCVTKTFFGDDFIPNDIFIGCPGNSEGDEVEGR ASCVLVTGPNMGGKSTLMRQCGLVIILAQLGCYVPAESLCFTPVDRVFTRLGASDRIMAG ESTFYVELSETASILHHATRHSLVLLDELGRGTATYDGTAIASAVVKELADKICCRTLFS THYHSLVEDYANNATVRLGHMACMVENECEDPSQETITFLYKFITGACPKSYGFNAARLA NLPEEVIQSGHRKAREFERSTISLRLFRKLCQFAEDAAPDNARFTSLVQLLNTL NT seq 4125 nt NT seq  +upstreamnt  +downstreamnt atggcgaagcaaagctctctgttcaactttttcaccaagtctccgccgccggtttccaaa ccgaagcagagttcctccccggccgaggcggacctgccgggctccgtggaaaagtccaac tcgtctcccaaggaggaagccagacagacgcaaagcaaccagcagcagcagcagccgagt aagaacacgaaagttaaacagagcaagactgcaagcggaggattccagaaactgttcgga gacaaggccgcgacgactgaaaacagctccaaatgctcatttggtgctggagccctcatg tgggccaaactagaaggacacccctggtggccatgcatggtggtgcctcaacctctgaca ggccagcaaatgaggggcaaaggtcgggatcagcgcatacatgtccatttctttgatgaa cctccaactagaggatgggtcagcaccaaatacattagagagtaccaagggtctgacagc agtgacgttaaaccggggggtgtgttcttcagcagcaaacctgtgatccgccgtgcaatg gagctcgccgataaatccttttttgatagtcctgaaaaacgcttaaaaatgccggtgtgc agggatccatctgatgaggaagaagaagaagaaatggagcttgacaagtcaacagtgagt gctgaagaggtcagtgacatggacgaaaagaaaagcaaaggagtgaagtcgcccaaagtc agtcgacgttcttcgcgttcctccgcagagcaaggaggcaaacccaagcgccgccgcatc atcgtggcctcagacagcgacggatcagacgaggagttcaaaccagagcaagctgcatcc accagcgaggaagaggaggaagaggcgaccgtgagcagtgaagaggaggagaaggagagc agccaagagtcggaagcagacagcccaatcaaacctgtgaagcgcaaacgtcccgcagac aattccgttattaagaaagcaaagactccggctacgccctcagctggacctaaacgagct ccaaagacgatcacatctgacgccaaatcccgcttgtctgccttctccgccccagacagc ttcgagagccaagcaaacggatctggtcccgccggaggagcgacaacctgggatcatgag aagctggaatggctgcaggacggtcggaggaaggacgggaagagacgccgtcagagtgag gacgactacgacccgaccaccctgtacgtccccgaagacttcctgaacagaaacactcct gggatgcgccgctggtggcagctgaagtctgggatgtttgacacggtgattttctacaag gtgggaaagttttacgagctgtaccacatggacgccgtgattggtgtcaacgagctcggc ctgacattcatgaaaggcacgtgggcgcactccggcttcccggaaatcggctttgcgcgt ttctcagacgtgttggtgcagaagggctacaaggtggcccgcgtggagcaaacagagacc ccagaaatgatggaagcgcgctgcaagaccatggccaagcccacgaagttcgaccgcgtc gtcagaagggaagtctgccggattatcacccgcggtacccaaacctacagcgtgttggac ggcgctccttcagagacccagagcaagttcctcctgagcttaaaggaaaaggctgaagac gagagctctggacgccatcgcacctatggcgtttgcttcgcagacacatcagtgggatat ttccacatcggtcagttctcagatgatcgccactgctcacggctacgcaccttaattgca cacttcccacctgctgaggtcctcttcgaaaagagcaacccttctgccgagacccgcaaa atcttgaaggcgtctctgtcctccgcgctgcaggaagggctgaacgcagggacacagttt tgggatgctcagaagacgctgaaaaccctctcagaggagaattactttgaggagacggct ggagacggattcctccctgcgctcctgcggaggatgacctcggagagcgactccttgtgt ctgtcccctaaggaaggctatgagttggcgctgtcggctttaggcggctgcatcttctac ctgaagaaatgtctggtcgacaaagagctgctctccatggccaactttgaagagtatgtc cctgttgatgtggagttagagaaagctgctggacccgccagttttttctcccagacccgt cagcggatggtcctggacggtgtgacgctggcgaacctggagatcttccagaacggttca gggggaactgaagggacgctgttggagcgtttagactcctgctctactccgtttggtaag aggctgctgaagcagtggctctgcgctccgttgtgtaaccccgcctccatcagggacagg ctggacgccatggacgacctgattgcagcgcaggctcaggccgccgatgtctcagagctg ctgaagaagcttccagatctggagcggcttttgagtaaaatccacagcattggcacccct ctgaagggccaggaccacccggactctagagcggtgctctatgaggaagtcacctatagc aagcgcaagattgctgatttcctatcagcgctagaaggcttcaaaaccatgcaagagatc atttctgctttcactccggcttcaggcgacattcgctccacgctgcttcgtcagattgtc agcctgaagacggaagaggatggcctcttcccagatctgtcggcagagctgaagcgctgg gaaacagctttcgaccaccagaaagcccgcaccactggagtcataacccctaagaccggc ttcgatccggagttcgaccaggctttcgcaggaatcaaaacctgcgaacgggacctgcag gactacctggagcggcagaagaagaggctcggctgtaagaacatggcgtactggggaacc gggcggaaccgctttcagatggaagttcccgacagtgtttcggagaggaacatccccgag gagtatgaagtgaaatccaccaagaaaggctggaagcgctacgtgacgaaggagagcgag cggctcttctcagagctgcagggattcgaagagaagagagacgcagcgctgaaggactgc atgaggaggctcttctacaactttgacaagaactacagagactggaggacggctgtggaa tgcatggccgtgctggatgttttgctggctttgtcccgctacagtctgggtggcgacggg ccgatggccagaccccaggtggttctaccagaggacaatgaccgcagcacgcccttcatt aacctcaccggatcccgtcacccgtgtgtgactaaaacgttttttggggatgacttcatt cctaatgacatctttatcggttgccctgggaacagtgaaggtgatgaggtggaaggtcgc gcctcatgtgtccttgtaacgggtccaaacatgggggggaaatctaccctaatgagacag tgtggacttgtgattatcctagcccagctcggatgctacgttccagctgagagcctttgc ttcactccagtcgatcgggtcttcactcggctgggcgcatcagatcgaattatggctggt gagagcaccttctacgtggagctcagtgagacggccagcatcctgcaccacgccaccagg cactctctggtgctccttgatgaactcggaaggggcacggctacatatgacggcacagcc atcgccagcgctgttgtgaaggagcttgctgataagatctgctgtcgcactctgttctcc acgcattaccactccctagtggaggactatgctaacaacgccactgtgcgactgggccac atggcgtgcatggtggagaacgaatgtgaggatcccagtcaggaaacgatcacgttcctc tacaagttcatcaccggcgcttgtccgaagagctacggcttcaacgcggcgcggctcgcc aacctgccagaggaggtcatccagtctggacacaggaaggccagagagtttgagagaagc accatcagcctcagactattcaggaaactctgccagttcgctgaagatgctgctccagac aacgcacgcttcacttcactcgttcaactgcttaacaccctgtag

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