KEGG   Xiphophorus hellerii (green swordtail): 116713107
Entry
116713107         CDS       T07363                                 
Name
(RefSeq) elongation factor 1-alpha 1-like
  KO
K03231  elongation factor 1-alpha
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    116713107
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xhe03019]
    116713107
   03016 Transfer RNA biogenesis [BR:xhe03016]
    116713107
   03012 Translation factors [BR:xhe03012]
    116713107
   04131 Membrane trafficking [BR:xhe04131]
    116713107
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xhe04147]
    116713107
Messenger RNA biogenesis [BR:xhe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     116713107
Transfer RNA biogenesis [BR:xhe03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    116713107
Translation factors [BR:xhe03012]
 Eukaryotic type
  Elongation factors
   116713107
Membrane trafficking [BR:xhe04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    116713107
Exosome [BR:xhe04147]
 Exosomal proteins
  Proteins found in most exosomes
   116713107
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 Gtr1_RagA
Other DBs
NCBI-GeneID: 116713107
NCBI-ProteinID: XP_032408965
LinkDB
Position
22:23740169..23744949
AA seq 462 aa
MGKEKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGINKMDSTEPNYSQKRYEEIVKEVSTYIKK
IGYNPDTVAFVPISGWNGDNMLEPSPNMTWFKGWKINRKDGSASGTTLLEALDAIQPPTR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPVNVTTEVKSVEMHHEALT
EALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPQEAANFTAQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVDMIPGKPMCVESFSEYPP
LGRFAVRDMRQTVAVGVIKGVEKKLSTTGKITKSAQKAQRNK
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgggaaaggagaagctccacatcaacatagtcgtgatcggccatgtggactctggcaag
tccaccactacaggacacctcatctacaagtgtggtggcatcgacaagagaactattgag
aagttcgagaaagaagctgctgagatggggaagggctcattcaagtacgcctgggtgctc
gacaagttaaaggcagagagggagcgtggcattacaatagacatctcgctttggaagttt
gagaccagcaagtactatgttaccatcatagatgctccaggccacagggacttcatcaag
aacatgatcactggtacctctcaggctgactgtgccgtgctcattgtagcggcaggcgta
ggagagttcgaggccggcatctccaagaacggacaaactcgggagcacgctctcctggca
tacacactcggagtgaagcagctgattgtgggcatcaacaaaatggactcgaccgagcca
aactacagccagaagcgctacgaggagattgtgaaggaagtgagcacctacatcaagaag
attggctacaacccagacactgtcgccttcgtgcccatctctggttggaatggagacaac
atgctcgagccaagcccaaacatgacatggtttaaggggtggaagattaacaggaaggat
ggcagtgcatcagggaccacactattggaggctctggatgctattcagcccccaacccgc
ccaacagacaaacctctacgtcttcccttgcaggatgtctacaaaatcggaggtattgga
actgtgcctgtgggtcgggtggaaacaggaatactgaaacccggcatggttgtgacgttt
gcgcctgttaatgtgaccaccgaggtgaagtctgtggagatgcaccatgaggcactgacg
gaggccctcccaggcgacaacgtgggcttcaacgtcaagaatgtgtcagtgaaggacatt
cgccgtggcaacgtggctggggatagcaagaacgaccctccacaggaagctgccaacttc
actgctcaggttattatcctcaaccatcctgggcagatcagtgctggttatgctcctgtg
ctggactgccacactgctcatatcgcctgcaagtttgcagagctcaaggaaaaaattgac
cggcgctctggcaagaagctggaagacaatcccaaatctctcaaatctggagatgccgcc
atcgttgatatgattcctggcaagcctatgtgtgttgagagcttctccgagtatcctcca
ttgggtcgttttgcagtgcgtgacatgcgtcagaccgtggcagtgggagtgataaaaggt
gtggagaagaaattgtctaccactggtaaaatcaccaagtctgctcagaaggcccagagg
aacaaatga

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