Xiphophorus hellerii (green swordtail): 116713138
Help
Entry
116713138 CDS
T07363
Name
(RefSeq) ras and Rab interactor 2-like isoform X1
KO
K23687
Ras and Rab interactor 2/3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116713138
Membrane trafficking [BR:
xhe04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
116713138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
RA
RA_3
SH2
RA_2
Lpg0393_VPS9
FERM_f0
TUG-UBL1
Motif
Other DBs
NCBI-GeneID:
116713138
NCBI-ProteinID:
XP_032409029
LinkDB
All DBs
Position
22:complement(25377568..25407329)
Genome browser
AA seq
1077 aa
AA seq
DB search
MSISPSCEQETKGSFFKLIDSIVWEIGTLKKEMGRKTETAEDNRETDSHVGLSEEVGRLF
LQASPCPGMGAGPTKARDSGYDSLHRRLSVLERLMHTHAVWLHLGLSHQDAAGILQSQPA
GSFLVRRSTSLQRKVISLRMDKDSAEPIKDFAVKESLYTFSLEGSELSFADLFRLLAFCC
ISRDVLPFTLKLPEAISSARSFADLEEAAKLGAGFWDSKLCRRAVSVSLPKTAGPDRPPP
PALRPLSCPTTPACPKLRIRSPTQLDCCLPNGALCFINPLFIKIYQPDGGNQVSSARTVN
QLLRDESNNNISPTNRRERSSCLERPQTYSSDLGDESQRPQENSGSITTSPCSKGQTGSS
QALGVSPSPPPRPPPPRLPKHLPAPPIQQQSMPEKVAWINIPKEEEKEKSSNLFSRLGSS
LSISPSSSPPKRLSISSPISIPRRTLPLPLTAFSSSPRRSKASPSSSHEDAQCHLALEEQ
TIEKAILRTKLSKQKSVHSTGQGACSASEPSVMTGSKFSEVTPGEASQEDCTNGGQRLSD
MSLSTDSSDSLDYSQSSTFFIPPLHDPSPPTIADFNTHLPLSIPPSHLRYSSINIDDEVD
DDDYEEEEPDYGVSLESEQDQELTMLPPGVHTKRRPSASALVLQKALQGKFRKMSGVFNS
LLTPEKRAIRKVLEMSKDKNSYFGSLVQDYLSYMGEGAGAQAWQGYTSGLELLQTIRQFI
TQMKSYLRQTSEMEPPIESLIPEDQIDRVLEKAMLKCVLKPLKLPISAALKEFQVRSGSW
QELKENLSLAKARRPQEMGVADALPPDHVAIEKIRQKFHTMCKLYSPEKKVCMLLRVCKL
IYTIMEDNSGRLYGADDFLPMLTYVLAQCDMPELDNEILYMMELLDPSLLHGEGGYYLTS
AYGAMSLVKNFQEDQAARVLSSETRDTLHQWHRRRTTQRSAPSVDDFQNYLRVALQEVDS
GCTAKTLPVRPYTTVEELCQLCALKFKVSDPKNYGLFLQMEGSSQQLAADTHPQKIKAEL
HSRPQPVPFHFVYRRLAKNGTLSASLSSTPAATPDPQANLNHQSTDPQALSGGSISV
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcagtccatcctgtgagcaggagacgaagggcagtttcttcaagttgattgac
tcgatcgtctgggagatcggcacactgaagaaggagatggggagaaagacagagactgcg
gaagacaaccgggaaactgattcacatgtggggctgagcgaagaagtgggacgtctattt
cttcaagcctcgccttgtcctgggatgggagccggaccgaccaaggcaagagattcaggc
tatgactctctccaccgtcggctcagtgttctggagagactgatgcacacgcatgccgtg
tggctgcacctgggcctcagccaccaggatgcagctggaatactgcagagccagcccgct
gggtcattcctggtgagaaggtccaccagcctgcagaggaaagttatttctctacgcatg
gacaaggactctgcagaacccatcaaagactttgcagtcaaagagagtctgtacacattc
tctctggagggatcagagctgagctttgcagacctttttcgcctcttggctttctgctgc
atcagcagggatgtgctgcccttcacgctgaagcttccagaggccatctcttctgccaga
agtttcgcagatcttgaggaggctgccaaactcggagcaggcttctgggacagtaagttg
tgcaggagagcagtatccgtatctctgccaaagacggcaggtcctgatagaccacctcca
cctgctctgagaccgctctcctgtccaactacccctgcatgtcccaagcttcgaattcgc
agccccactcagctggactgttgcctgcctaacggcgcactgtgcttcatcaaccccctt
tttataaagatttatcagccagatggtggcaaccaggtcagctctgccagaactgtaaac
cagttacttagagatgagtccaacaacaatataagtcccaccaataggagagagagaagc
tcgtgtttggaacgaccgcagacgtacagctcagacctcggtgacgagagccagcgacct
caagagaactcagggagtataaccacaagtccatgcagtaaaggacaaactggtagcagc
caggcgttgggtgtctctccatcccctcctcctcgaccgccacccccccgtcttcccaaa
cacctgcctgctcctcccatccaacagcaaagcatgcccgaaaaagtcgcctggattaac
attccgaaggaggaagagaaggagaagagcagcaacctcttttcacgcctcggctcctcg
ttgagcatcagtccatcatcctcgcctccaaagagacttagcatcagctccccaatatcc
attccccggcgaaccctgcccctccctctgacggctttctcctcctctccacgtcgatcc
aaagcatctccttcatccagtcatgaggatgctcagtgccatctggcgctggaggaacag
acgattgagaaggccatcctaaggaccaaactgtcaaagcaaaagtcggttcattctaca
ggccagggcgcctgcagtgcttcagagccttcggtgatgacaggaagcaagttttcagaa
gtcacacctggagaagcatctcaggaggactgtaccaatggaggccaacgactgagtgac
atgagcctctccacagattcctcggattccctagattactcccagtcctctaccttcttc
attcctccactgcatgaccccagcccccccactatcgctgacttcaacacccatctcccc
ctctccatcccaccatcccacttacgttacagcagcataaatatagacgacgaagttgat
gacgacgactatgaagaagaagaacctgactacggcgttagcctcgagagtgagcaagac
caagaacttactatgctcccacccggggtccacacaaagcggcgccccagtgccagcgcc
ctggtcctgcagaaagccctgcagggaaaatttcggaaaatgagcggcgttttcaactcg
ctgctgacgccagagaagagggcgatccgcaaagtcctggagatgtccaaggataagaac
tcatactttggctccctggtgcaggactatctgagctacatgggggagggtgctggcgcc
caggcctggcagggctacacctcaggactcgagctgcttcagaccatccgccagtttatc
actcagatgaagagctacctgcgacaaacctccgagatggagccaccgattgagagcctc
attcctgaagatcagattgacagagtcctggagaaggccatgctgaagtgcgttctgaag
ccgctgaagctgcccatcagcgcagcgctaaaggagttccaggtgcgcagcggcagctgg
caggagctgaaagagaacctgtcattggccaaggcccggcgacctcaggagatgggcgtg
gccgacgctctgcctcccgaccacgtggccatagaaaagattaggcagaagttccacacc
atgtgtaagctgtactccccagagaagaaagtctgcatgctgctaagagtctgcaagcta
atttacaccatcatggaagacaactcaggtcgtttgtatggagccgatgacttcctcccc
atgctgacctacgtgctggcccagtgtgacatgcctgagctggacaatgagatcctgtac
atgatggagctgctggacccttcgctgctgcatggggaaggtggttactatctgaccagc
gcctacggagccatgtccctggttaagaacttccaggaggatcaggctgccagggtgctg
agctccgaaaccagagacacgctacaccagtggcaccggcggcgcaccacccagcgttct
gcgccttctgtcgacgacttccagaactacttgcgtgtggcactgcaggaggtggacagt
ggatgcacggctaagactctgccagtgcgaccgtacaccacggtggaggaattgtgccag
ctgtgcgccctgaagtttaaggtgtcggaccccaagaactacggcctgttcctgcagatg
gagggcagcagccagcagctggcagcagacacccaccctcagaagatcaaagctgagctt
cacagccgtccacagccggttcccttccactttgtctaccgccgcttggccaaaaacggc
acgttgtcagcatctctctccagcacccctgccgcgacccctgatccccaggccaaccta
aaccaccagagcacggaccctcaggccctcagcggcggctccatctctgtatga
DBGET
integrated database retrieval system
