Xiphophorus hellerii (green swordtail): 116713237
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Entry
116713237 CDS
T07363
Name
(RefSeq) neurofilament light polypeptide-like
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xhe04812
]
116713237
Cytoskeleton proteins [BR:
xhe04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
116713237
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
ATG14
Motif
Other DBs
NCBI-GeneID:
116713237
NCBI-ProteinID:
XP_032409233
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All DBs
Position
22:17389086..17392879
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AA seq
729 aa
AA seq
DB search
MSHRMDDRFGFPRRALHDTYSQPKPRRSELETRRTSADASSPHARPEKRNEKELMRGLND
RLAGFIEKVHRLESHNHLLEKEIEDIRGKVKPASCLEEEYGPELRRLRQLLQEITHQKNQ
IEIEHHNLEEELSALRKRHERETESRSEAESSIVTLKKDMGEAYQAKLLLDRKVESLVDE
INFLKRNHEAEVSEMCDQIQDAQLKFKAHEFGHPGVTAALRDIRTQLEGHTGSDVQLVGE
SFRVQFARLTEAAEAKREALKASQREIQEYKKRLQARSVELDCAKGTREALEAQLHDVED
RHKEELIHYQNTIKELENELINCKFDMSGYLREYQDLLNVKMALDVEILSYRKLLCGEEA
RLSSISVSDPQIPLPHIYHQSPVYTLPSFSRPGVTQRRAEPKYKFVEEIITETTREIEMS
EFEETGSEETDVGKDEQECGKSEKGGSEEEGDHQDSREDEGNQMSDHQQSQVASDEKLES
EDDRKVADDVEDNNKEQNHSEESEKAAALSGENMDTEVDNNKPVEDMKEKETADIPRQTD
ISSKQHDSDESDLVKSDEDKQGSTKAESVIAVQSVKPSNETVVSTYEEDNKTLQHSGVEV
QEKAKELIGEAVALTKMEKCVEIAKAPSTGPENQVKKVSQTEQKEITKTDSAKVEEENTK
STVDATRETIKDQDKSQSSKSTAKAEGEKTEKGDKTQIASAALQKEKTSVTAETKESQQV
PADSSQTPI
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacaggatggatgacaggttcggcttcccgcgtagagcccttcacgatacgtat
tcacaacccaagccgagacggtcggaattagaaaccaggaggacttccgcggacgcgagc
tccccacacgccagacctgaaaagcgcaacgagaaagagctgatgcgcggcttgaacgac
cgactcgcgggcttcatagaaaaggtgcaccggctcgaaagccacaaccatctcctggag
aaggaaatcgaagacatcagagggaaggtgaagcccgcgtcttgtttggaggaagagtac
ggccccgagctgaggcggctgaggcagctgctgcaggaaatcacccaccagaagaaccag
attgagatcgaacatcataacctggaggaagagctttccgccttgaggaaacggcatgag
cgggagacggagagcagatcagaggctgagagcagcatagtgaccctgaagaaagacatg
ggcgaagcgtaccaggccaaactactgctggaccggaaagtggagtccctcgtggatgaa
atcaactttctgaagagaaaccacgaggccgaagtgtcagagatgtgtgaccagattcaa
gatgcgcagcttaaatttaaagcgcacgaattcggccaccccggcgtcactgcggcactc
cgggacatcaggacgcagctggaaggtcacaccgggtccgacgtccagctggtcggggaa
agtttccgagttcagttcgctagactgacggaggccgccgaggccaagagggaggcgctg
aaagcgagccagcgggagattcaggagtacaagaagcgtctgcaggccaggagcgtcgag
ctggactgcgccaaaggcaccagagaagctctggaggcgcagcttcatgatgtcgaggat
cgccacaaggaggaacttattcactatcagaacacaatcaaagagcttgaaaatgagctc
ataaactgcaaattcgacatgtccggctacctgagggagtaccaggacctcctgaacgtc
aagatggctttggatgtggagatattatcatacaggaaacttctctgtggtgaggaggct
cgtctgtcctccatctccgtctccgaccctcagatcccattgccccatatctaccatcaa
tcacctgtttacaccctccccagcttcagtcgaccaggagtcacgcagaggcgagcagag
cccaagtacaagtttgtggaggagatcataacagaaaccaccagggagatcgagatgtca
gagtttgaggagacgggatcagaggagacggatgtggggaaggatgagcaggagtgtgga
aaaagtgagaaagggggcagcgaggaagagggtgatcatcaggacagtcgagaggatgaa
ggaaaccagatgtctgaccatcagcagagtcaagtagcctccgatgaaaagttggagagt
gaagatgatagaaaggtagctgatgatgtggaggataataacaaagaacaaaaccacagc
gaagaatcagagaaggcagcagctctcagcggtgaaaacatggacacagaggtagataac
aacaaaccggttgaggacatgaaggagaaagaaactgcagatatacctcgtcaaacagat
atctcttcaaaacagcatgattcagatgaatcagatctagttaaatctgatgaggataaa
cagggttcaactaaggcagaaagtgttatcgcggtacaaagtgtgaagccttctaatgaa
actgtggtttcaacatatgaggaagataacaaaactctacagcacagtggtgtagaggtg
caggagaaagccaaagaattgattggagaagcagttgcgttgacaaaaatggagaaatgt
gtagaaatcgcaaaagcaccttctactggaccagaaaatcaggtaaaaaaagtgagccaa
acggaacaaaaagaaattactaagactgattctgcaaaagttgaggaagaaaacacaaaa
agcaccgtagatgccacacgtgaaaccattaaggaccaagataaatcccaatcttccaaa
tctacagcgaaagcagagggtgagaaaacagaaaaaggtgacaaaacccaaatcgcttca
gctgctttgcaaaaggaaaaaacatctgtgactgcagaaacaaaagagtcacagcaggtg
cctgcagacagcagccagactccaatctaa
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