Xiphophorus hellerii (green swordtail): 116713285
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Entry
116713285 CDS
T07363
Symbol
fancl
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL isoform X1
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03460
Fanconi anemia pathway
xhe04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116713285 (fancl)
09124 Replication and repair
03460 Fanconi anemia pathway
116713285 (fancl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116713285 (fancl)
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116713285 (fancl)
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116713285 (fancl)
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116713285 (fancl)
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
116713285 (fancl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCL_d3
FANCL_d2
FANCL_d1
FANCL_C
zf-RING_2
SLX1_C
zf-rbx1
PHD_NSD
DUF2286
Motif
Other DBs
NCBI-GeneID:
116713285
NCBI-ProteinID:
XP_032409290
LinkDB
All DBs
Position
22:7792603..7813976
Genome browser
AA seq
410 aa
AA seq
DB search
MESLLIRDNPLLLPLNKKKTVYDGFITVQERDFRIRILLPPDLQLKRARLHCCWQLRHLL
REYEHIVKQRLQQSVDLGGFILELKTVLEVALNRCPEGRSVPPPRYYSQLISEMETVGWD
KMLFIDMDFQTLKLRAEDSSGRQHTLTVKLKSKHPAEAPDCSADLPVPLTITWTPQSTLE
QLHSQFLLVLESLTDFWDVLDEIDRKTWILEPEKPSFSDTMRRIAIGNNVSIKVEVDPRH
PKMLPECCLLGADHVVTPLRNKLNANMHMWNPDSSVLNNLRDVLEIEFPSPATHEKSSFN
VECGICYSYRLEDAIPDQVCNDPRCGQPFHQACLYEWLRALPSSRQSFNLVFGECPYCSK
VCGRRQPTQRPGLSAAYIFSSYSYGSIHHLALSSQSAFTRSLVARTESEF
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggagagcttattaatacgcgataacccgctgcttttacctctcaacaagaagaaaaca
gtctatgatgggtttataaccgtacaggaaagagacttcagaataagaatacttctccct
ccagatctccaactgaagcgggccaggctgcactgctgttggcagctgagacacctgttg
cgtgaatatgagcacatagtgaagcagaggctgcagcagtcggtggatcttggcggtttc
attctggagttgaaaaccgtcttggaagtggctctaaatcgatgtcccgagggtcgctcc
gtcccgcctcctcgatattactcccagctcatatctgagatggagactgtcggatgggat
aagatgcttttcatagacatggacttccaaacactgaagctgagggcagaggactcctct
ggaagacagcacactctcactgttaaactcaagtcaaagcatccagcagaggctcctgac
tgttcagctgacctgccagtccctttgaccatcacctggacaccacagagtactctagag
cagctccacagccagttcctgctggttctggagtccctgacggacttctgggacgtcctg
gatgagatcgacaggaagacctggattctagagccggagaaacccagcttttccgacacg
atgaggcggatcgccataggaaacaacgtctccatcaaggtggaggtggatccgcgacac
ccgaagatgctgccagagtgctgcctgctgggagccgatcatgtggtgactccgctgagg
aataaactgaacgccaacatgcacatgtggaacccggactccagcgtcttgaacaacctc
cgggatgttttggagatcgaattcccgtcaccggccacccacgaaaaatctagtttcaat
gtggagtgtggcatctgttactcctatcggcttgaagacgccatcccagatcaagtgtgt
aatgacccccgctgtggccagccgttccatcaggcctgtctctatgagtggctgagagca
ctcccctccagcaggcagagcttcaaccttgtttttggagagtgtccttactgcagtaag
gtatgtggacgcaggcagccgacacaaaggcctggcctcagcgccgcatacatattcagc
agctactcatatggatccattcatcatctggccttgtcttctcaaagtgccttcacacgc
agcttagtagctagaactgagtcagagttctag
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integrated database retrieval system