KEGG   Xiphophorus hellerii (green swordtail): 116713285
Entry
116713285         CDS       T07363                                 
Symbol
fancl
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL isoform X1
  KO
K10606  E3 ubiquitin-protein ligase FANCL [EC:2.3.2.27]
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe03460  Fanconi anemia pathway
xhe04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    116713285 (fancl)
  09124 Replication and repair
   03460 Fanconi anemia pathway
    116713285 (fancl)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xhe04121]
    116713285 (fancl)
   03400 DNA repair and recombination proteins [BR:xhe03400]
    116713285 (fancl)
Enzymes [BR:xhe01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     116713285 (fancl)
Ubiquitin system [BR:xhe04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    116713285 (fancl)
DNA repair and recombination proteins [BR:xhe03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex
     116713285 (fancl)
SSDB
Motif
Pfam: FANCL_d3 FANCL_d2 FANCL_d1 FANCL_C zf-RING_2 SLX1_C zf-rbx1 PHD_NSD DUF2286
Other DBs
NCBI-GeneID: 116713285
NCBI-ProteinID: XP_032409290
LinkDB
Position
22:7792603..7813976
AA seq 410 aa
MESLLIRDNPLLLPLNKKKTVYDGFITVQERDFRIRILLPPDLQLKRARLHCCWQLRHLL
REYEHIVKQRLQQSVDLGGFILELKTVLEVALNRCPEGRSVPPPRYYSQLISEMETVGWD
KMLFIDMDFQTLKLRAEDSSGRQHTLTVKLKSKHPAEAPDCSADLPVPLTITWTPQSTLE
QLHSQFLLVLESLTDFWDVLDEIDRKTWILEPEKPSFSDTMRRIAIGNNVSIKVEVDPRH
PKMLPECCLLGADHVVTPLRNKLNANMHMWNPDSSVLNNLRDVLEIEFPSPATHEKSSFN
VECGICYSYRLEDAIPDQVCNDPRCGQPFHQACLYEWLRALPSSRQSFNLVFGECPYCSK
VCGRRQPTQRPGLSAAYIFSSYSYGSIHHLALSSQSAFTRSLVARTESEF
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggagagcttattaatacgcgataacccgctgcttttacctctcaacaagaagaaaaca
gtctatgatgggtttataaccgtacaggaaagagacttcagaataagaatacttctccct
ccagatctccaactgaagcgggccaggctgcactgctgttggcagctgagacacctgttg
cgtgaatatgagcacatagtgaagcagaggctgcagcagtcggtggatcttggcggtttc
attctggagttgaaaaccgtcttggaagtggctctaaatcgatgtcccgagggtcgctcc
gtcccgcctcctcgatattactcccagctcatatctgagatggagactgtcggatgggat
aagatgcttttcatagacatggacttccaaacactgaagctgagggcagaggactcctct
ggaagacagcacactctcactgttaaactcaagtcaaagcatccagcagaggctcctgac
tgttcagctgacctgccagtccctttgaccatcacctggacaccacagagtactctagag
cagctccacagccagttcctgctggttctggagtccctgacggacttctgggacgtcctg
gatgagatcgacaggaagacctggattctagagccggagaaacccagcttttccgacacg
atgaggcggatcgccataggaaacaacgtctccatcaaggtggaggtggatccgcgacac
ccgaagatgctgccagagtgctgcctgctgggagccgatcatgtggtgactccgctgagg
aataaactgaacgccaacatgcacatgtggaacccggactccagcgtcttgaacaacctc
cgggatgttttggagatcgaattcccgtcaccggccacccacgaaaaatctagtttcaat
gtggagtgtggcatctgttactcctatcggcttgaagacgccatcccagatcaagtgtgt
aatgacccccgctgtggccagccgttccatcaggcctgtctctatgagtggctgagagca
ctcccctccagcaggcagagcttcaaccttgtttttggagagtgtccttactgcagtaag
gtatgtggacgcaggcagccgacacaaaggcctggcctcagcgccgcatacatattcagc
agctactcatatggatccattcatcatctggccttgtcttctcaaagtgccttcacacgc
agcttagtagctagaactgagtcagagttctag

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