Xiphophorus hellerii (green swordtail): 116713460
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Entry
116713460 CDS
T07363
Name
(RefSeq) VPS10 domain-containing receptor SorCS3-like isoform X1
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116713460
Membrane trafficking [BR:
xhe04131
]
Endocytosis
Others
Others
116713460
Endosome - Lysosome transport
116713460
Endosome - Golgi transport
116713460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
116713460
NCBI-ProteinID:
XP_032409521
LinkDB
All DBs
Position
22:18264302..18325685
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AA seq
1231 aa
AA seq
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MTLWSFWSCFLLAFIQLFPFHLKLATRAEISFPRLANRLYPMEVTSPMGHMIRKSAGIKV
SLKVSDRNEVLHMSETDGPPRPKYKQEMKNETVITNGSTVNNFSTLKIPDKKCDNISTAV
IETPKATFSIGERKKRSVGVSYNEHLDRSITGEARRSVRTVQGASNFRGEYRRTGEESRG
SNPKQSEPHLDTSTFALSGDSTHNQAMVHWSGQNSSVILILTKLYDLTMGTVTESSLWRS
TDYGSTYTKLNDKVTSRTVLSYLYVCPTNKQKILMLSDPEVESAVLISSDEGASFEKFPI
NFNVLSLLFHPAQEYWILAYSHDYKLYSSMDFGKKWQLVHENVMPGRFYWAVMGLDRESD
VVHIETRIAKGRAQYVKCRAQRCTEGDRQYLFPGHVDTNSLVVQDEYVFTQVTKSGRASY
FVSYMRESFRQMKLPKYCLPKDMHIISTDEKQVFAAVQEWNQNNTYSLYISDSPGVYFIL
SLENLRTSRGPAGNLLVDFYKVEGINGMYLANKIVDNHIKTFITYNKGQTWALLPAPATD
VSGKNLHCILPFCSLHLHLEMSENPYTSGPITSKKSVPGIIVATGNIGNELSSTNLGMFI
TSDAGNSWRQIFDEEYNIWFLDNGGALLAVLHAAMPIRQLWISLDEGKKWDRHSFSLVPL
YVDGVLMEPESDNHIITFFGHFSHRSEWQLIKIDYKGLFSRRCMDGDYQTWSLHNKEEQC
VMGEKQKYMKRRPGNRCMLAQDYSRIYSSEPCPCNSYDFECDYGWERQADGKCSPAFWFN
PNGVAKSCSSSQSFLNSTGYRKVLSNNCKEEGRNVYLPKRVACQPKPPQGLHLSTSHGEL
SAAIGSNVTFMIHLDNGESPSTSIQLDFGDGIKITYSNLSRTDDGIKHIYRKTGIYRVIA
TAENNLGSDSSALFLHITSPVDRVYLSAPIVAIREKAANLTAVVWPSHTRTLTFFWWFEN
SSEPIITLEGSISHMFLREGENKVTVQVACGSSVLEDSKVITVKEFFRSLLLSFSPALDE
HNPDIPEWREDIGRVVRTALSQQVPGVSESQLMVSLYPGLPTTAELFILSDEQMSSEHKK
RSEEALDTISHIFVTALNQGLVHFELKANIHIVVSMTQQTLAPLVDSNSIHSGPAMLMLI
SVVFVGIAAFFIYKFKRKIPWIHVETEDPHEKDPEVISTVGQNDAMSKVKLSEFPSQKEL
MEKELEGRSRGGFGRNMERIVTREFPNCTNV
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgacactttggtcattttggagttgctttcttttggcgttcattcagctattccccttt
cacctcaagttggcgactcgggcggagataagttttcctagactggcaaacagattgtac
cccatggaggtaacgtcgccgatgggacatatgatcagaaaatcagcggggatcaaagtc
tcgctgaaagtcagtgaccgcaatgaagttttgcacatgtctgaaactgacggacccccg
agaccaaaatataagcaggagatgaaaaatgagaccgtgattacaaatggctcaacggta
aacaatttcagcactctcaaaataccagacaaaaagtgtgacaatatttcgacggcagtg
attgaaacacccaaagccacattttcaatcggggaaaggaagaaaagaagtgtcggcgtg
tcctacaacgaacatttggacaggagtatcactggggaagcgcgcaggtccgtgagaact
gtccaaggtgcttcgaacttcagaggcgagtaccggcgcacgggggaggaaagcaggggc
tcaaacccgaagcagagcgagcctcacctggacacctccacttttgctctgtcgggggac
tcgacgcacaaccaggcgatggtgcactggtccggccagaatagcagtgtgatcctgatt
ttgactaagctgtatgacttaaccatggggaccgtaaccgagagctcactctggagatcc
actgattatggcagcacctacaccaaactcaatgataaagtgacctccaggacagtttta
agctacctgtatgtctgtcctaccaacaagcaaaagatattgatgcttagtgacccagag
gtagagagcgctgttctcatcagctcagatgaaggggcaagcttcgagaagttccccatt
aacttcaacgtcctcagcctcctcttccaccctgcacaggagtactggattctggcttac
agtcatgactacaagctctacagctcaatggactttgggaagaaatggcagcttgtccac
gaaaatgtgatgccaggcagattctactgggcggtaatggggctggacagagaatcagat
gtggtccacatcgagacgcgcatcgcaaaaggccgagctcagtatgtgaagtgcagagcc
cagagatgcacagagggcgacagacagtatctctttcctggacacgtagacaccaactcc
ctcgttgtgcaggacgaatatgttttcactcaggtaaccaagtcaggacgagccagttac
tttgtctcctacatgagggaatccttcaggcagatgaaattaccaaagtactgtttgccg
aaggacatgcatattatcagcacagatgagaagcaggtatttgctgctgtccaggagtgg
aaccagaacaacacttacagcctgtatatctcagactcccccggcgtctactttatcctt
tcattagagaacctgaggaccagcagagggcctgctggtaacctactggttgacttttac
aaggttgagggcataaacggaatgtatcttgccaacaaaatagtggataatcatattaag
actttcatcacatacaacaagggacagacatgggctctgctgccagcgccagcaacagat
gtgtcaggaaaaaaccttcactgcattttgccattttgctcgttgcatctccatctggag
atgtcagagaatccctacacatctgggcccatcaccagcaaaaaatctgtcccaggaatt
attgtggccacaggaaacattggaaatgagctgtcctctaccaaccttgggatgtttata
acatcagacgcagggaatagctggagacagatttttgacgaagagtacaatatttggttt
cttgacaacggaggagctttgcttgcagttcttcatgcggcaatgcctattagacaacta
tggatcagtcttgatgaagggaagaaatgggatcgccacagtttctccttggtgcctctg
tatgtggatggagttttaatggagcctgagtctgacaatcacattatcacttttttcgga
cacttcagccaccgttcagagtggcagctgatcaagattgactacaagggtctttttagc
aggagatgcatggacggtgactatcagacatggtccctgcacaacaaggaagagcagtgt
gtgatgggtgagaagcagaagtatatgaagcggcggcctggcaaccgttgcatgttggct
caagattattccaggatctactcctcagagccgtgtccctgcaactcctatgatttcgaa
tgtgactatggctgggagcgccaggcggatgggaagtgctctcctgctttttggtttaat
ccaaatggtgtggctaaaagctgcagctccagccaaagcttccttaacagcacagggtat
cgtaaggttttgtccaataactgtaaggaggaaggaagaaatgtgtacttgcctaagagg
gttgcatgccaacccaaaccaccccagggcctgcatctgtccaccagccacggagaactc
agtgctgccattggaagcaatgttactttcatgatccaccttgataatggagagtctccg
agcaccagcatccagctagacttcggggacggaatcaagatcacatactctaacctgagc
cggaccgacgacggcatcaagcacatctacagaaagactgggatttaccgtgtgatagct
actgcagaaaacaacctgggatctgacagcagcgcactttttttgcacatcaccagtcca
gtggatcgtgtgtatctctccgctcccattgtggccatcagggagaaagcagctaatctc
acggcagtagtttggccaagccacacaagaactctgaccttcttttggtggtttgaaaac
agctccgagcccattataactctggaaggaagcatctcgcacatgtttctcagagaggga
gaaaacaaggtcacggtccaggttgcttgtggaagcagcgtattggaagactcaaaagtt
ataactgttaaagagttcttcaggtcactgctgttgtcgttttcaccagctcttgacgaa
cacaatcctgacatccccgagtggagggaggacataggccgtgtggtgcggacagctctg
tcacagcaggtgcccggggtttctgagagtcagctgatggtgtctctgtaccctggactt
ccgaccacagctgagctttttattctgtctgatgagcaaatgtcaagtgagcacaagaaa
agaagcgaggaggctttggatacaatatcacatatttttgtcactgccctgaaccaaggc
ctggtccattttgagctaaaagcaaatattcacattgtcgtgtccatgactcagcaaacc
ttggcaccactggtggattcaaactcaattcacagtgggcccgcaatgctaatgctgatc
agcgtggtctttgttggtatagctgcattttttatctacaaattcaaaaggaaaattcct
tggatccatgtggagactgaagacccccatgagaaggatccagaggtgataagcacagta
ggtcaaaacgatgccatgtccaaggtcaagctaagcgagtttccatctcagaaagaactc
atggagaaagagctggaaggcagaagcagaggaggatttgggagaaatatggagagaatt
gtgacaagggaatttcctaattgtactaacgtctaa
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