Xiphophorus hellerii (green swordtail): 116713527
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Entry
116713527 CDS
T07363
Name
(RefSeq) homeobox protein OTX1 B
KO
K09326
homeobox protein OTX1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116713527
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
116713527
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
CPSF73-100_C
Motif
Other DBs
NCBI-GeneID:
116713527
NCBI-ProteinID:
XP_032409604
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Position
22:complement(24851657..24861902)
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AA seq
330 aa
AA seq
DB search
MMSYLKQPPYGVNGLGLSGAAMDLLHPSVGYPATPRKQRRERTTFTRSQLDVLEALFAKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSGSSAKARPPKKKSSPARESTG
SESSGQFTPPAVSSAGSSSSSTSSTNHTGPAALSSTSTSISTVSSIWSPAISPGNAPAPA
VAPLPEPGPPSNASCMQRSVSGSAAAATSYPMSYNQTPGYGQGYPGPSSSYFSSVDCGSY
LAPMHSHHHPHQLSPMTASSMSGHPHHHISQSSGHHHHHHQAYGGSGLAFNSSDCLDYKE
QTAASSWKLNFNATDCLDYKDQASWRFQVL
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctacctcaaacagcccccctatggggtcaacggcctggggctgagcggcgct
gccatggacctgctgcacccctcggtggggtacccagcgactcccaggaagcagcggagg
gagcggaccaccttcacccgctcgcagctggacgtcctggaggctctgttcgccaaaacc
cggtacccggacatcttcatgcgggaggaggtggcgctgaagatcaacctgccggagtcc
cgagttcaggtgtggttcaagaacaggagggccaagtgtcgccagcagcagcagagcggc
agcagcgccaaagccaggccgcccaagaagaagtcctctccggcccgggagagcaccggc
tcggagagcagcggtcagttcactcctcccgccgtgtccagcgccggctcttcctcctcc
tccacctcgtccaccaaccacacggggcccgccgcgctcagcagcacctctacctccatc
agcaccgtctcctccatctggagccccgccatctctccgggaaacgcccccgcgcctgcc
gtcgccccgcttcccgagccgggacccccgtccaacgcctcctgcatgcagcggtccgtg
tcgggctcggccgccgccgccacctcctaccccatgtcctacaaccagacgccgggctac
ggccagggctacccgggcccctccagctcctacttcagcagcgtagactgtggctcctac
ctggcgcccatgcactcccaccaccacccccaccagctgagccccatgacggcctcctcc
atgtccggccacccgcaccaccacatcagccagtcatcggggcaccaccaccaccaccac
caggcctacggcggctccggcctggccttcaactcctccgactgcctggattacaaagag
cagacggcggcctcgtcgtggaaactcaactttaatgccacggactgcttggactacaaa
gaccaggcctcctggaggttccaggtcttgtga
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