Xiphophorus hellerii (green swordtail): 116713621
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Entry
116713621 CDS
T07363
Name
(RefSeq) calpain-2 catalytic subunit-like isoform X1
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04141
Protein processing in endoplasmic reticulum
xhe04210
Apoptosis
xhe04217
Necroptosis
xhe04218
Cellular senescence
xhe04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116713621
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
116713621
04217 Necroptosis
116713621
04218 Cellular senescence
116713621
09144 Cellular community - eukaryotes
04510 Focal adhesion
116713621
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xhe01002
]
116713621
Enzymes [BR:
xhe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
116713621
Peptidases and inhibitors [BR:
xhe01002
]
Cysteine peptidases
Family C2: calpain family
116713621
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_8
CAPN13-like_C_EFh
DUF4028
Motif
Other DBs
NCBI-GeneID:
116713621
NCBI-ProteinID:
XP_032409718
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Position
22:complement(10651395..10660725)
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AA seq
727 aa
AA seq
DB search
MSGIAAKIQHFREKSKGIGTNSHTLKYLNQDFEELRRSWLERGQLFQDDCFEALPSSLGF
NELGPNSHKVRGVTWMRPTELCRNPKFISEDATRTDICQGALGDCWLLAAIASLTLNKQV
LSRVVPHDQSFTENYAGIFHFQFWQFGDWIDVVVDDRLPTRDGELLFVHSVEGSEFWSAL
LEKAYAKINGCYEALSGGSTIEGFEDFTGGIAERHELARPDPRLFKIIQKALKRGSLLGC
SIDVRLSSSISTMLAIFEVFVSHNLFLLQITSAADSEAITHCKLVKGHAYSVTGADQVEY
QGDMVQLIRIRNPWGQVEWTGAWSDNSYEWRSVSSEDRERLTNQSEDGEFWMSFSDFLRE
YSRLEICNLTPDTLTDDEYQKWAETEFEETWRTGVSAGGCRNYPDTFWTNPQFVIKLDEV
NDDPDDGEEEGCTVIVGLMQKNKRCRRKMGEDMETIGFAIYDLPKEYSGKTRVQMKKDFF
LYNRSAARSETFINLRELCNRFCLPPGEYLIVPSTFEPNKNGDFYVRVFSEKQANVQEID
DPVESHVEKIDIDEDDISDRFKRLFGQLAGEDVEISAFELERILNRVVARRDDIKTSGFG
LATCRNMINLLDKDGTGKLGLVEFKILWTKIEKFLDLFSSKDVDQSGYMSSSEMRLAVEE
AGFSLNNSLHQIIVARYSETNLTIDFDNFVSCLIRLETLFNTFEVLDKDGSGTIKLNLME
WLNVTML
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtattgcagccaaaattcagcatttcagagagaaatccaagggaattggaacc
aactctcacacactgaaatatctgaaccaagactttgaggagttgagaagaagctggcta
gagagaggacagctgtttcaggatgactgcttcgaagctctgccttcatccttaggcttc
aatgagctcggcccaaactcccacaaagtgcggggagtcacctggatgagacctactgag
ttgtgccgaaacccaaaattcatctctgaagatgctacaaggactgatatttgtcaggga
gcacttggtgactgctggctcctggcagctattgcctcccttactctcaacaagcaggtt
ttgtcccgtgttgtgccccatgaccaaagctttactgaaaactatgctggaattttccac
ttccagttctggcagtttggtgactggatagatgtggttgttgatgatcgcttgcccacc
agagatggggaactcctgtttgttcactcagtggagggctctgagttttggagcgccttg
ctggagaaagcctacgctaaaataaatggatgctacgaggctctctctggaggcagcacc
attgagggctttgaagacttcactgggggcatcgcagagcgacatgagttggcgagacca
gatccacgtctcttcaaaataatccaaaaggccttgaaaagaggctcccttttgggatgc
tccattgatgttcgtctgagttcttctatcagtactatgcttgctatctttgaggtattt
gtttcacataacctttttttgttgcagatcactagtgcagctgattctgaggcgatcaca
cattgcaagctggtgaaggggcatgcttactctgtcacaggagccgaccaggttgagtat
caaggagacatggtgcagttgatcaggatcagaaacccatggggtcaagtggagtggacg
ggagcatggagtgacaactcttatgaatggagatctgtgagcagtgaggatagggagcga
ctgaccaaccaatctgaggatggagaattctggatgtccttttccgacttccttcgtgag
tattcccggcttgagatctgcaaccttacccctgacactctgacagatgacgaataccag
aaatgggcagaaacagagtttgaggagacatggaggacaggtgtgtcagctggtggctgc
aggaactatccagacactttctggacaaatcctcagtttgtgatcaagctggacgaggtg
aacgacgaccccgatgatggtgaggaggagggatgcactgtcattgtgggcctgatgcag
aaaaacaagcgctgtaggaggaaaatgggagaagacatggagactattggatttgcaatt
tatgatctacccaaggagtactctggcaagacacgggtgcagatgaagaaagatttcttc
ctgtacaaccgttcagcagcacgctccgagaccttcatcaacctgagggagctgtgcaac
cgcttctgtcttccccctggagagtatctcattgttccctccacctttgagcccaacaaa
aacggggacttctatgtgcgggtgttctctgagaaacaagcaaatgtccaagagattgat
gatccagtagaaagccatgtggagaagattgatattgatgaagatgatatcagtgacaga
ttcaagaggctttttggacagcttgcaggagaggatgtggaaatttctgcattcgagctg
gaaagaatcctcaacagagtagtggcaaggagagacgacatcaaaaccagtgggtttggt
cttgcaacttgtcgcaatatgattaacctgctggataaagatggtactggtaagctgggc
ctggtagagtttaagatcctgtggacaaagattgagaaatttctggatctgttcagttca
aaagatgtagatcaaagtggatatatgagctcctccgagatgcggttggccgtcgaggag
gcgggtttctctctgaacaactcgctccatcagatcattgtggctcgctacagtgaaacg
aacctcaccattgactttgacaactttgtgagctgcctgattcgcttggagacacttttc
aacacttttgaagtgctggacaaagatggttctggtaccatcaagctgaacttaatggag
tggctgaatgtgacaatgttgtaa
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