Xiphophorus hellerii (green swordtail): 116713624
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Entry
116713624 CDS
T07363
Name
(RefSeq) calpain-2 catalytic subunit-like
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04141
Protein processing in endoplasmic reticulum
xhe04210
Apoptosis
xhe04217
Necroptosis
xhe04218
Cellular senescence
xhe04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116713624
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
116713624
04217 Necroptosis
116713624
04218 Cellular senescence
116713624
09144 Cellular community - eukaryotes
04510 Focal adhesion
116713624
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xhe01002
]
116713624
Enzymes [BR:
xhe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
116713624
Peptidases and inhibitors [BR:
xhe01002
]
Cysteine peptidases
Family C2: calpain family
116713624
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
DUF5580_M
Motif
Other DBs
NCBI-GeneID:
116713624
NCBI-ProteinID:
XP_032409721
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Position
22:complement(10660883..10668708)
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AA seq
700 aa
AA seq
DB search
MTSTADRLAQQQQRAEGIGTNQKAVKFCDQDYEALRQQCLSRGRLFEDGSFGAESKSLGY
NELGPYSSKTRGIVWKRPTELCSNPKFIDDGATRTDICQGALGDCWLLAAIASLTLDQRI
LGRVVPTEQSFAEDYAGIFHFQFWQYGEWVDVVIDDRLPTRDGKLLFVHSAEGSEFWSAL
LEKAYAKVNGCYEALSGGNTIEGFEDFTGGIAEIYTLSKAPPKLFQIMRKALSLGSLLGC
SIDITSASETEAVTALKLVKGHAYSVTGAEEVSYRGRDVQLVRVRNPWGEVEWTGPWSDG
SYEWKYVSEADKSKLDHVAEDGEFWMSYSDFITHFSKLEICNLTPDTLESDEVGHWNNYQ
FEGMWRVGSTAGGCRNNAATFCSNPQFVMRLEDVDDHPLDGKHGCTFLVGLMQKDGRQKR
RLNCELETIGFAIYKVPDQYKGCGNVRLGPDVLLRQKAVAMSSTFINTREVCERFRLPPG
EYAIIPSTFHPHKNGKFVLRVFSEKEANTRRLEEKIDAKIKEKQVSESDIDPHVKKIFKE
IAGNDMEVSAFELVGILNNAVSNSFDIKTDGFSLETARLIVSLLDKDENAKLGLKEFHVL
WNKLQKYLEIFKSHDTDNSGTMSSLEMRAAATKAGFQVNSAVLQAIVNRYADAQFAINFD
SFVSCLIKLEMLFKMFKALEKGDSGKIELNIQQWMCLAIY
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgacctccacagcagatcgactggcccagcagcagcagagggcggaaggcatcggcacc
aaccagaaggcagtgaagttttgcgatcaggattatgaggccctgcggcagcagtgtctg
agcaggggacgcctgtttgaggatggcagctttggtgccgagagcaagtcactaggctac
aatgagctggggccgtactcatccaagacgagaggcattgtttggaagaggccaacggag
ctgtgttcaaacccaaagttcattgacgatggcgccacaaggacggatatttgtcaggga
gcattaggggattgctggcttctggctgccattgcttctctaactctggaccagcgaatc
ctaggaagggtggtgcccactgaacagagcttcgctgaggattatgcagggatatttcac
tttcagttttggcagtatggtgagtgggtggatgtcgtaatagatgatcgtttacccacc
agagacgggaagcttctgtttgttcattccgcagagggctcagagttctggagcgctctc
ctggagaaagcttacgcaaaggtgaacggctgctacgaagctctgtctggaggaaacacc
atcgagggctttgaggatttcacaggagggattgctgagatttacaccttgagcaaagct
ccaccgaaactcttccaaatcatgcggaaagccctgagtctaggttcactcctgggctgc
tctattgatattaccagcgccagtgagacagaggcagtaaccgctctgaagcttgtgaaa
ggacatgcatactctgttactggtgcagaagaggtcagctacagaggcagggatgttcaa
ctggtccgtgtcagaaacccatggggagaagtggaatggacaggtccttggagtgacgga
tcctatgagtggaagtatgtcagtgaggctgacaaatcaaagttggaccacgtggcagaa
gatggagagttctggatgtcctactcagacttcatcacgcacttctccaagctggagatc
tgcaacttgaccccagatacgctggaaagcgatgaggttggccactggaacaactaccag
ttcgaagggatgtggagggtgggatccaccgctggcggctgcagaaacaatgcagccacg
ttctgctccaaccctcagttcgtcatgcgtctggaggatgtggatgaccaccctctggat
gggaagcacggatgcaccttcctggtggggttgatgcaaaaggatggacggcagaagagg
aggcttaattgcgaactggagaccatcggctttgccatttacaaggttccagatcagtac
aaaggctgcggcaacgttcgcctcggcccagatgtgttgctgcgtcagaaagccgtggcg
atgagcagcaccttcatcaacacccgcgaagtgtgcgaacgcttcagacttccccctgga
gaatacgccatcattccctcaacctttcaccctcacaagaacggcaaatttgttctcagg
gtattctcagagaaagaggccaataccaggcggctggaggagaagattgatgctaaaatc
aaagaaaagcaggtgtctgaaagtgacattgatcctcacgtcaagaaaatctttaaggaa
attgctggcaatgacatggaggtatctgcctttgagttagttggaattctgaacaacgct
gtctctaacagctttgacatcaagacagacggattcagcctcgagacggcgcgtctcata
gtcagtctgctggataaagatgaaaatgccaagttggggctaaaggaattccatgttctc
tggaacaaacttcagaaatacctggaaatcttcaagagtcacgacacagacaactcgggt
acaatgagctccctcgaaatgagagccgctgctactaaagcaggtttccaggtgaacagc
gctgtgctgcaggccatcgtcaatcgctatgcagatgctcagtttgcaatcaactttgac
agctttgtgagctgtctcattaagctggaaatgctcttcaaaatgtttaaggccctggag
aaaggagactcagggaagattgagctgaacatacaacagtggatgtgcctggcaatatat
tag
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