Xiphophorus hellerii (green swordtail): 116713722
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Entry
116713722 CDS
T07363
Symbol
nphp1
Name
(RefSeq) nephrocystin-1 isoform X1
KO
K19657
nephrocystin-1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xhe03037
]
116713722 (nphp1)
Cilium and associated proteins [BR:
xhe03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
116713722 (nphp1)
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GFIT
Motif
Pfam:
SH3_1
SH3_9
SH3_2
hSH3
MTR4-like_stalk
Motif
Other DBs
NCBI-GeneID:
116713722
NCBI-ProteinID:
XP_032409844
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All DBs
Position
22:23205506..23214325
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AA seq
702 aa
AA seq
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MPPKRRGPLQLAQREVDEVERQLDSLEKSVKSQNGSKEEALQRCYELRVSAEKTLKTLQN
LTKADELAPVGNYDQRKLEEERRLQNILGRLVTLSLELSPPGPSTQAGNVSTKDIDNNSD
DDDDSDDNFEEDSDGKDEGDGSTPEKSPSQSAPQIYKVLSDFKAEQEGDLSVRKGEVLKI
IKKTADGWWLAQDKIGNRGVVPKTYLKIGVGVNDEHDKDSDENLDEDEDEDDDEDDEIQQ
SEQEEEEDEDVDEDEADDENKTKASNWSTFRKALTEIDTTDVLSAMGAIPSGFRPSTLSK
LLAEEGERYRGSHYIQPELSQSQLSFKDLFLDPDTGRVRARQVRNCVCFNLWSCKMIPTP
GVGVQVLSRHIRMCAFDGTQRIFQALSNIHTVRASYTSKDPKTWNFSPRMTSILPTILDG
DCFLRCNSLSPNIGVLFELGVTFLRNSTGERGDLSCGWAFLKLTDDSGNPLQNRTYELPI
NGGTPYEKKVMLEAPVSRRSPGGVFQQMLQARRQPKLIVKLKSASSRTRLQLSLLPDTLL
HCLSCVHLLVLHRQLLADTLLMDRPTMQNADLICSPILSTFPVLLDQTDLLDALRSAWLE
AETNMSRTQKRDLSYLKQEFSKVYMSSVYFLLHTPSLPCYRWADPPSEEQRARVIYSTLE
ALKNSQQATGQSASPGVFFDSSHSHLAFDVQELTFDLLSARR
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgcctccgaaaaggcgaggaccgcttcaactcgcacaaagagaagtggacgaagtcgaa
agacagcttgacagtctggaaaagagtgtgaagagccaaaatggatccaaagaggaggca
ctgcaaagatgctacgagttgcgagtttctgcagaaaagactctaaagactctgcagaat
ttgacaaaggctgatgagctggctccagtgggaaactatgatcagaggaaactagaagag
gagagacgtctgcaaaacatcttggggcgtctggtcactctgtctctggagctttcacca
ccaggccccagcactcaagctggcaatgtttcaacaaaagatattgacaacaatagtgac
gacgacgacgacagcgacgataattttgaggaagacagtgatggtaaagatgaaggggat
ggaagtacgcctgaaaagtcgccctctcagtcagcccctcaaatctacaaggtcctcagc
gatttcaaagcagagcaggaaggagatctgtctgttcggaaaggagaagtgttgaagata
attaaaaagacggcagatggatggtggctggctcaggacaagatagggaacagaggagtt
gttcctaaaacctatctgaagattggcgttggtgttaatgatgagcatgacaaggattcg
gatgagaatttggatgaggatgaggatgaggacgatgacgaagatgatgaaatccaacag
tcggaacaggaagaagaggaagatgaagatgtagatgaagatgaggccgacgatgaaaac
aaaaccaaagcttctaactggtcaactttcagaaaggctctgacggagattgatacaaca
gatgtgctgtcagcgatgggagccattccttcaggattcaggccatcaactctcagtaaa
ctcctggcagaagaaggggagcgatatagaggaagtcattatattcaacctgagctcagc
caatcacagctttcctttaaagatctctttttagacccagacaccggcagggtccgtgct
cgccaggtcaggaactgtgtttgttttaatttgtggagctgcaagatgattcccactcct
ggggtcggagttcaggtcctcagcagacacatccgtatgtgtgcttttgatggaacgcag
cgtattttccaggcgttgagtaacatccacacggtgagggcgtcgtacacctcaaaggac
ccaaagacatggaacttctctccgaggatgaccagcatcttgccaactatcctggacgga
gactgcttccttcgctgcaactctttgtctccgaacattggagttctttttgaacttgga
gtcacttttttgcgaaactcgacaggtgagagaggagacctgagctgtggttgggctttc
ctcaaactaactgacgacagcggaaatccactccaaaacagaacctatgaactgccaata
aatggcggaacgccatatgagaagaaagtcatgttggaagcacccgtttcgagaagatct
ccgggtggcgtttttcagcagatgctccaggcccgacggcagcccaaactgattgttaag
ttgaaatcggcaagcagtcggaccagactgcaactcagtctcctcccggacactctgctg
cactgtctgagctgtgtccacctgctggtcctgcaccgccagctgctggccgacacgctg
ctcatggacagacccaccatgcagaatgcagatcttatatgcagtccaatactttcaact
ttcccagtgctgttggaccagacagacctgctagatgccctcaggagtgcctggctggaa
gctgagaccaatatgagcagaacgcagaagcgagacctgtcatatctgaagcaggagttt
agtaaagtctacatgtcgtcggtgtacttcctgctgcacacgccctctctgccctgctat
cgctgggccgacccgccctcagaggaacagcgggccagggtcatctacagcaccttggag
gctctgaaaaactcccagcaagccaccggccaatcagcatccccaggagtcttttttgac
tcctctcattcacaccttgctttcgatgtccaggagttgacctttgatctcctttccgcg
agacggtag
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