Xiphophorus hellerii (green swordtail): 116713817
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Entry
116713817 CDS
T07363
Name
(RefSeq) paired box protein Pax-2a isoform X1
KO
K15608
paired box protein 2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116713817
04131 Membrane trafficking [BR:
xhe04131
]
116713817
03036 Chromosome and associated proteins [BR:
xhe03036
]
116713817
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
116713817
Membrane trafficking [BR:
xhe04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
116713817
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
116713817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_32
HTH_23
Homeodomain
DUF6115
HTH_Tnp_IS1
Ribosomal_S13_N
Motif
Other DBs
NCBI-GeneID:
116713817
NCBI-ProteinID:
XP_032409982
LinkDB
All DBs
Position
22:16386454..16423634
Genome browser
AA seq
432 aa
AA seq
DB search
MDIHCKADPFSAMHLSHAGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQ
LRVSHGCVSKILGSYQKAFQRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMF
AWEIRDRLLAEGVCDNDTVPSVSSINRIIRTKVQQQFHPSPDGSVTPLSTPGHTIVPSTA
SPPVTSASNNPVGSYSINGILGIPRSNGEKRKRDDVLWSGNHLDGRKIGHYGSDGSGPGS
DSQGSVESLRKHLRADAFTQQQLEALDRVFERPSYPDVFPTSEHIKPEQANEYSLPSLNA
SLEDVKPSLSTSASSDLASSVSQSYSVVTGREMASTTLPGYPPHVPPTGQGSYPTSTLAG
MVPGGDFSGNPYSHPQYTTYNEAWRFSNPALLMPHPVAPRLPLLPLPMTATSHPGDQLNL
QGRSFNLHVVPV
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggatattcactgcaaagcagaccccttctcggcgatgcacctatcccacgcagggcac
ggcggtgtgaaccagctcggcggggtgtttgtgaacggcagacccctcccggacgtggtg
cggcagcggatagtggagctggcccaccagggcgtccggccctgcgacatctcccgacag
ctacgggtcagtcacggctgtgtcagcaaaatcctcggcagctatcagaaggcatttcag
aggtactacgagaccggcagtattaaaccgggagtcatcgggggctccaaaccaaaggtc
gcaacgccgaaagtggtggataaaatcgcggagtacaagcgccagaatcccacaatgttt
gcgtgggagataagagaccgactcctggcggagggggtctgcgacaacgacacagtaccc
agtgtttcatccatcaacaggattatccgcaccaaagtccagcagcaattccacccgtcc
cctgatggatccgtcacgccgctctccacacccggccacaccatagtgcccagcacagcc
tcgcctcccgtgaccagtgcctccaacaatcccgtaggatcctactccatcaacggcatt
ctgggtattccccgctccaacggcgagaaaaggaaacgggatgatgttctctggagtggc
aaccacttggatggaaggaaaataggacattatggctcagatggctcaggccccggcagt
gactctcagggcagtgtggagagtttaaggaaacatctgcgagcagacgccttcacccag
caacagctggaagccctggatcgcgtgttcgaacggccttcttaccctgatgtcttcccc
acttcagaacacatcaaaccagagcaggcgaatgagtactccctcccgtccctgaatgcc
agcctggaagatgtgaagcccagcctctccaccagtgccagctccgacctcgcttccagt
gtctcgcagagctactctgttgtgacaggtcgagaaatggcgagcaccactttacctggc
tacccaccccatgtcccccccacaggacaaggcagctaccccacctccacacttgcaggc
atggttcctgggggtgacttttctggaaacccttattctcatccccaatacacaacctac
aatgaggcttggaggttcagtaatccagcgttactgatgccgcatcccgtggctccgcgc
ctcccgctgctgccactgcctatgaccgccactagtcaccccggagaccagctcaacctg
cagggccggagcttcaacctccacgttgttcctgtctga
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