Xiphophorus hellerii (green swordtail): 116713930
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Entry
116713930 CDS
T07363
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi-like
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04080
Neuroactive ligand-receptor interaction
xhe04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116713930
04082 Neuroactive ligand signaling
116713930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xhe04040
]
116713930
Ion channels [BR:
xhe04040
]
Ligand-gated channels
GABA-A
116713930
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
116713930
NCBI-ProteinID:
XP_032410096
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Position
23:complement(23136303..23146213)
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AA seq
450 aa
AA seq
DB search
MTVQLNELLLICLTVTQGGCMFPNNHWGEWNGSQLQPTIQRLMKGYNRYLRPNFNEGPVE
IGMSLDIASIDAISEINMDYTATIFLRQRWRDSRLVFPGNESVSVDGRLVSLLWIPDTFI
PDSKRSFLHDVTVENRLIRIFSNGTVLYALRITATIACNMDLTKYPMDKQVCTLQLESWG
YNIQDVVFYWTRGNDSVKGLDTLRLAQYSVESYYTSVTEAVYETGHYPKLVLHFSLRRNV
LFFILETYVPSILLVVLSWVSFWISQSSVPARTCIGVTTVLTMTTLMMGARTSLPNANCF
IKAIDVYLGICFTFIFGALLEYACAHFYTMQHQTIEDLHRELLREFAESNGNGLVPIVNS
SQPNRSVEVGTTAEEPAEEPAKSDTKNPAASTEKAQSQGCGLSSVKDASRRAAAVFIVEN
PHNIDRHARTAFPTAFLFVNILYWLYYLFL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgactgtccagctgaatgagcttctcctcatctgccttaccgtcacacagggtggttgc
atgttccctaacaaccactggggtgaatggaacggctctcagcttcagcccaccattcag
agactcatgaagggatacaaccgctacctaaggcctaatttcaacgaaggtcctgtggag
attggaatgagtctggatatcgccagcattgatgccatctctgaaataaatatggactac
acagcgaccatctttctccgtcagcggtggcgcgactccaggctggtgtttcccgggaac
gagagcgtgagcgtggatgggcggctggtgtcgttgctttggatcccggacaccttcatc
ccggactcaaagcgctccttccttcacgacgtgacggtggagaaccgcctcatccgcatc
ttcagcaacggcaccgttctttacgcactccgcatcacggctacaattgcctgcaacatg
gacctgaccaaataccccatggacaaacaggtgtgcaccctgcagctggagagctggggc
tacaacatacaggacgtggtgttctactggacaagagggaacgattctgtgaagggtttg
gacaccttgcggctggctcagtacagcgtggagagctactacacctcggtgacggaggct
gtgtacgaaacaggtcattaccccaagctggtgctgcatttttccctgcgcagaaatgtc
ttgttctttatcttggagacgtatgtcccctccattctgcttgtggttctctcctgggtc
tctttctggatcagccaatcatctgtgccagcccgaacgtgcatcggagtgaccaccgtc
ctgaccatgaccactctcatgatgggggcccgcacatccctgccaaatgctaactgcttc
ataaaggccatagatgtttacttgggcatctgcttcaccttcatcttcggtgccctgttg
gaatatgcctgtgctcatttttacacaatgcagcatcaaaccatcgaggatctacacaga
gagcttttgagggagtttgccgagtccaatggaaacggcctggtgccaatcgtcaactcc
agccaaccgaaccggtccgtagaggtgggcaccactgcagaggagccggctgaggagcca
gcgaagagcgacaccaagaaccccgcggcttcgacggaaaaagcgcagagtcagggctgc
ggcttgtcgtctgtgaaagacgcctcacgcagagcagccgctgtcttcattgtggaaaat
ccacacaacatcgatcgccacgcccgtaccgctttccccacagcgttcctctttgtcaat
atcctgtattggctctattatctctttctctga
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