Xiphophorus hellerii (green swordtail): 116713936
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Entry
116713936 CDS
T07363
Symbol
lsm11
Name
(RefSeq) U7 snRNA-associated Sm-like protein LSm11
KO
K25592
U7 snRNA-associated Sm-like protein LSm11
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116713936 (lsm11)
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
116713936 (lsm11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
116713936
NCBI-ProteinID:
XP_032410105
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All DBs
Position
23:22795759..22798773
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AA seq
302 aa
AA seq
DB search
MEESERKSARPDSKHSASASSGPAADTGDDEANELNVCSEKFDPLLALYSAAAPPLPFPN
IKCFNNVAEYESFLKGGRGRAKPENVEKRQRKAMKGVADPERIERLKKLMVNNPVSEGGD
SSGAAPRTRRRQKPLKNVLTRMPLCQGSPLGELHRCVEERIRVRVHIRTFKGLRGVCSGF
VVVFDKFWNMAMVDVDETYREPLLGEALYHEKALTISRLFEQLSLQETLGGGEPREDDHD
DGAAEPKPSEDVGSKRDKGVVSVKARDSAAHQKKKYGKVHTRHINQLFIRGENVILVNPQ
PL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagcgaaagaaaaagtgcgaggccggacagtaaacactctgcgtcagcatcc
tcggggccggcggcggacacaggagatgatgaggcaaatgaactaaatgtctgctctgag
aagtttgacccgttgctggccctgtactccgcggcagcgccgccgcttcccttccccaac
atcaagtgcttcaacaatgtggcggagtacgagagcttcttgaagggcggccggggccga
gcaaagccagagaatgtggagaaaaggcagcggaaagcgatgaaaggggtggccgacccg
gagcgcatcgagaggctgaaaaagctgatggtcaacaacccggtgtccgagggaggggac
agcagcggagcggcaccgcggacgagaaggaggcagaaaccgctgaaaaatgtcctgacg
aggatgcccttgtgtcagggcagtcctctgggggagctgcaccgctgcgtagaggagagg
atcagagtccgagttcacatcaggacctttaaaggcctgaggggcgtgtgctctggcttc
gtcgtcgtcttcgacaagttctggaacatggccatggtggatgtagatgagacgtacaga
gagcctctacttggagaggcgttgtaccacgagaaggcgctcaccatttcacggctcttt
gagcagctaagtctccaggaaaccctggggggcggcgagccgagggaagacgaccacgac
gacggggcggcggaacccaagccgtcagaggacgtcggaagcaaacgagataaaggcgtc
gtctcggtgaaggcccgggactcagcggcccatcagaagaagaagtatgggaaggtgcat
acgcgccacatcaaccagcttttcatccgcggtgaaaacgtgatcttggtaaacccacag
cctctctga
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