Xiphophorus hellerii (green swordtail): 116713945
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Entry
116713945 CDS
T07363
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase BRE1A-like
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116713945
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116713945
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
116713945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
BRE1
zf-RING_2
zf-rbx1
DUF948
Motif
Other DBs
NCBI-GeneID:
116713945
NCBI-ProteinID:
XP_032410114
LinkDB
All DBs
Position
23:complement(17814019..17822678)
Genome browser
AA seq
1023 aa
AA seq
DB search
MSGQKRPADPSGPSSSGAPPEKRRERDGEDGGPGVSAGAGGSTAVETVIKLGGVSNSEEQ
DIKALQAKNRKLGESLDQRQVIEDELRERIERLETRQATDDASLLILNRYWNQFDENIRL
LIRRYDQTSSEPEKSPTGEGRSLKPETPEPDGDSNQERAKDRGHQGETSNSFLATLASST
SEEMEAELQERVESSQKQASRLVEIYKNLKSTLDQLKTELDSGGDSGLKQVAIKLNSLLS
RENELLQQLTENLKQKHSHMTSESRSLGRAANKADQRVSELQARIEELQWDMEKIRRREN
RLNAHLSEILERVNSKGYKVCGEASSVCGTITINKRKFEEMNSELEENTELAENRLVELQ
KLQQDLQNVQQENNSMKTELLSRAEGLVKESSEYRCLQSQFSVLYNESLTLKAQLDETRA
RLNTTRTARLRQLEHMENDEVALQRKVRTEVFQLEDTLAQVKKEYEMLRIEFEQTLAANE
QAGPINREMRHLISTLQTHNQQLKGEVVKYKLRLRETQAELHQIRASKGSAILQSQSSTE
MDVKDEMTSPSTPAVSGEPVVKIEPDNGSSTPSSTGISLKTEPGIEPDANIKEEEKDEKK
EKEEKKEKDIIKKEEKDREREKEKERERPTRSSSSSGVKEEREKPGVSSQLEETGGDRLT
VIGGSKRKEMEQLKIVRTELKKAQESQREMKLLLDMYRSAPKEQRDKVQLMAAEKKTKSE
AEELRQRLRELEERERREGKKMADEEALRKIRSVEEQIDILNKKLSIAKQEEDALLSEMD
VTGQAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSNQIHKLLKEEKEELADQLLTLKT
QVDAQLQVVRKLEEKERLLQGTISTAERELALRTQALDMNKRKAQESVLLSEELRAQLEQ
VQQKLKLVREEVVENSISREKESFNARRAQEDISKLRRKIEKAKKPAEKISNGDEILNEE
INEYKARLTCPCCNSRVKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRI
YIG
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggcagaagcgtcctgctgaccccagcgggccctcttcctccggtgcccccccg
gagaagcggagggagcgggatggagaggacggaggtcccggtgtgagcgccggagccgga
gggagcaccgcggtggagacggtcatcaaactgggaggagtgtccaactctgaggaacaa
gacatcaaagctctccaagctaagaatcgaaagttgggagaatctctcgatcaaagacag
gtgattgaggacgagctgcgagagcgaattgagagactggagactcggcaggccacagat
gatgccagtttgctgattctcaacagatattggaaccagtttgatgagaacatccgactc
ctcatcaggcgctatgaccaaacaagcagcgaaccggagaaatctccaacaggcgaagga
cggagcctgaagccggaaactccagaacctgatggagattcaaaccaggagcgggccaaa
gacagaggtcaccaaggagagacgtctaactcctttttggcgactctagcgagcagcacc
agtgaggaaatggaggctgagctccaggagagggtggagtcgagccagaagcaggccagt
cgtttggtggagatctacaagaacctgaagagcaccttagaccaactgaaaacagagctt
gactctgggggcgacagtggtttgaagcaagtcgcaatcaagctgaactccctcctgagt
agggagaacgagctgcttcagcagctgaccgagaacctgaaacagaaacacagtcacatg
accagcgagtctcggtctttgggtcgtgcggctaacaaggcggaccagcgcgtcagcgag
ctgcaggctcggattgaagagctccagtgggacatggagaagatccgccgtcgagagaac
aggctgaatgcccacctgagcgaaatactggagagggttaacagcaaaggctataaagtg
tgtggtgaggccagcagcgtgtgtggaacaatcactattaacaaaagaaagtttgaggag
atgaacagtgagttggaggagaacacagagcttgcagaaaatcgcctcgttgagctgcag
aagctccagcaggacctgcaaaacgtccagcaagagaacaacagcatgaagacggagctg
ctgagtcgagctgaaggtttggtcaaagagtcctcagagtaccgctgtctgcagtctcag
ttctctgtgctctacaacgagtccctgaccctcaaggcccagttagacgaaacccgggct
cgcctcaacactaccaggacggcgcgccttcgacagctggagcacatggagaatgatgag
gtggccctgcagaggaaggtccgtactgaagtgtttcagctggaagacacgctggctcag
gtcaagaaggagtacgagatgctgcgcatcgaatttgaacagactctggcagccaatgag
caagcaggtcccataaacagggagatgcgtcaccttataagcacgctgcaaacacacaac
cagcagctgaaaggagaggtggtgaagtacaagttgagactgagagagacgcaagctgag
ctccaccagatccgcgcctcaaagggcagcgccatcctccagtcgcagtcgagcacagag
atggacgtgaaggacgagatgacctctccttcgaccccagctgtttctggagaacctgtg
gtcaaaatagagccagataatggctcgtccacacccagcagcactggaatttcactgaaa
acagagcccggcattgaaccggatgcaaacataaaggaagaggaaaaagatgagaaaaaa
gagaaggaggaaaagaaagaaaaggacattataaagaaagaggagaaagacagagagaga
gaaaaggagaaggagagagagcggccgacccggagcagcagcagcagcggggtgaaggag
gaaagggagaagccgggcgtcagcagccagctggaggagacgggcggagatcggctcact
gtgatcggaggatccaagaggaaagagatggagcagctgaagattgtccgaacagaacta
aagaaagcccaggagtcccagagagagatgaagctgctgctggacatgtatcgatcggca
ccaaaggagcagagagacaaagtccagctcatggctgcagagaaaaagaccaagtcagag
gcagaggagcttcggcagaggctgcgggagctggaggagagggagagaagagagggcaag
aaaatggcggatgaagaagctctgagaaaaatccgttcagtagaagaacagatagacatc
ctcaacaaaaagctgtccatcgccaaacaggaggaagacgcgctgctgagcgagatggac
gtgacgggccaggccttcgaggacatgcaggaacaaaatatccgcctcatgcagcagctc
cgagaaaaagacgacgccaacttcaagctgatgagcgagcggatcaagtccaaccagatc
cacaagcttctgaaggaggaaaaggaagagcttgccgaccaactcctcaccttaaaaact
caggtggatgcacagctgcaggtggtcaggaagctggaggagaaggagcgcctcctgcag
ggcacaattagtactgcggagagggagctggctctgcgaacacaagctttggacatgaac
aaacgaaaggctcaggagtctgtgctgctgtcagaggagctgcgggcgcagctggagcag
gttcagcagaagctgaagctggtcagagaggaggtggtcgagaacagcatctccagagaa
aaagagtccttcaacgcccggcgagcgcaggaggacatctccaagctaaggagaaagatt
gaaaaagccaagaaaccagctgagaagatcagcaacggagacgaaatcctgaacgaagaa
attaatgagtacaaggctcgtctaacgtgcccgtgctgcaactcccgggtgaaggacgcc
gtcctgacaaaatgcttccacgtcttctgcttcgagtgcgtcaagacgcgctacgacact
cggcagaggaagtgccccaagtgcaacgctgccttcggggcgaatgacttccatcgcatt
tacatcggctaa
DBGET
integrated database retrieval system
