Xiphophorus hellerii (green swordtail): 116714047
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Entry
116714047 CDS
T07363
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03015
mRNA surveillance pathway
xhe04261
Adrenergic signaling in cardiomyocytes
xhe04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116714047
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
116714047
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
116714047
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xhe01009
]
116714047
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116714047
03036 Chromosome and associated proteins [BR:
xhe03036
]
116714047
Protein phosphatases and associated proteins [BR:
xhe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
116714047
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
116714047
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
116714047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
116714047
NCBI-ProteinID:
XP_032410241
LinkDB
All DBs
Position
23:22703798..22759441
Genome browser
AA seq
446 aa
AA seq
DB search
MKCFSRYLPYLFRPPSTILSSTCHTEADIISTVEFNSTGELLATGDKGGRVVVFQREQES
KTQPHRRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIKWLPQQNAAYFLLSTNDKTVKL
WKISERDKRPEGYNLKDEDGRFRDPSTITTLRVPVLQPMDLMVEATARRVFSNAHTYHIN
SISVNSDLQTFISTDDLRVNLWNLEITDRSFNIVDIKPANMEELTEVITSAEFHPQQCHT
FAYSSSKGSIRLCDMRQAALCDKHCKYFEEPEDPSTRSFFSEIISSISDVKFSHNGRYLM
TRDYLTVKVWDLQMENKPLETYQVHDYLRGKLCSLYENDCIFDKFECVWNGSDSVIMTGS
YNNFFRMFDRNTKRDVTLEASRENSKPRAILKPRKVCVGGKRRKDEISVDSLDFSKKILH
TTWHPHENIIAVAATNNLYIFQDKVN
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgtttttcccgttacctcccgtacctcttccgccctccgagcaccatcctgtcc
tccacttgccacaccgaagctgacattatctcaacggtggagtttaactcaacgggggag
ctgttggccaccggggataaaggaggaagagtggttgtcttccagagggagcaggagagt
aagacgcaaccccatcgccgaggcgagtacaatgtttacagcacattccagagtcacgag
cctgagttcgactacctgaagagtctggagatcgaggagaagatcaacaagatcaaatgg
ctgcctcagcagaacgcagcgtacttcctgctctccaccaacgacaagaccgtgaagctg
tggaagataagcgaacgggacaagcgtccggaaggatacaacctgaaggatgaggacgga
cggttccgggacccgtccaccatcaccacgctgcgggtgcccgtgctgcagccaatggat
ttgatggtggaggcgacagccaggcgtgtcttcagcaacgcccacacataccatatcaac
tccatctccgtcaactccgacctgcagaccttcatctccaccgatgacctccgggtgaac
ctgtggaacctggagatcaccgaccgcagcttcaacatcgtagacatcaagccagccaac
atggaggagctgacggaggtcatcacctcggccgagtttcatccccagcagtgtcacacc
ttcgcctacagcagcagcaagggctccatacgcctctgtgacatgaggcaggcggcgctc
tgcgacaagcactgcaaatacttcgaagagccggaggatccgtcgacgcggtcctttttc
tcagaaatcatctcatccatctccgacgtaaagttcagccacaacgggcgctacttgatg
acaagggactacctcactgtcaaggtgtgggacctccagatggagaacaaaccactcgaa
acctaccaggttcacgactacctgcggggcaaactttgttctctgtacgagaacgactgc
atcttcgacaagtttgagtgcgtctggaatggatcggacagcgtcataatgacgggctcc
tacaacaacttctttcgaatgttcgaccggaacaccaagcgggacgtcacgctggaggcc
tcgagagagaacagcaaaccccgagcgatcctgaagcctcgcaaggtgtgtgtaggtggg
aaacgtcgcaaggatgagatcagcgtagacagcctggacttcagcaagaagatcctccac
acgacgtggcatccgcatgagaacatcatcgccgtggcggccaccaacaacctctacatc
ttccaggacaaagtgaactaa
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