Xiphophorus hellerii (green swordtail): 116714099
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Entry
116714099 CDS
T07363
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM isoform X1
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116714099 (rlim)
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116714099 (rlim)
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116714099 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
116714099
NCBI-ProteinID:
XP_032410309
LinkDB
All DBs
Position
23:complement(19329689..19338369)
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AA seq
661 aa
AA seq
DB search
MEGSDSVEQGGGDQPESQRRRQLDRLDREEAFYQFVNNLSDEDYRLMRDNNLLGNPGEVT
EDELFNRLQQIKDGPEQPQNNNPSTENTEDPVETPESSEDSQGGDSLLDWLNTVRRTGNT
TRTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQGPSEQPPAGQEEE
EVADPEPQVPMETEVVEEPVVEELAVIVEPEPEETPEEEVASQEVVEEPPSPPPPPPPAP
VVAEASPEQPPPCSSPRRGQRRPRSRSPEPRRTRARLARSRSPLRLDQLDGIPGPRHTYG
SQSPSSSTDTPPVPQVEGSSRTRQHILSRQSPADDNVHPPSVEAESIPEAQNVRPQEGEP
NGNEGGSAERRPPTIMLDLQVRRVRPGEYRQRDSIASRTRSRSQNSNNTFLYESERGGFR
RTFSRSERAGVRTYVSTIRIPIRRISDAGLGEATSMALQSMIRQIMTGFGELGYLMDSDS
DSSDSNRGTGTPADTESLTNPDASNADASAADEQPSVAAAAAAGARERTVETDVDEGLTT
GPQASGGRARLRPPINLEEPSSLPFLRLAHFFLLNDDDDDQPQGLTKEQIDNLSMRNFGE
SDALKTCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESV
I
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtctgacagcgtagagcaaggtggcggtgaccagccagagtcgcagcgccga
aggcagttggatcgtctagaccgggaagaggccttttatcaatttgtcaacaatctcagt
gatgaggactatcgtcttatgagagacaacaacctcttgggcaatccaggggaggtaact
gaggatgagctgttcaatagacttcagcaaatcaaagacggtccagagcagccgcagaat
aacaacccaagcacagaaaatacagaggatcccgttgaaactccagagagctctgaggac
tcccaaggtggggatagcttgctagactggctcaacacagtgagacgaaccggcaacaca
actagaactggacaccgcggaaaccagtcgtggcgagctgtgagccagaccaacccaaac
agtggtgactttcgctttagcttggagatcagtgtgaaccgcaacctggccgaacagcag
gccgctgctgaaggagaacaggggccttcagagcagcctccagcgggccaagaggaagaa
gaggttgcagatcctgaaccacaggttcctatggaaacggaggttgtggaagaaccagtc
gttgaagagttagctgtcattgttgagccagaacctgaagaaacacctgaagaagaggtt
gcgtcacaagaagttgtcgaggaacctcccagtccacccccacctccacctccagctcca
gttgtagcagaagcttcaccagagcaacccccaccttgttcttctccacgaaggggacaa
aggagaccccgcagccgtagcccagaaccacgcaggaccagagcccgcttagccagaagc
cgctcacctctccgtttggatcagctagatggcatacccggtccgcgacacacctacggc
tctcagagccccagttcttccactgacacacctccagtgcctcaagtggagggcagttct
cggactcgacaacatattctctccaggcaaagcccagcagacgacaatgttcatccaccc
agtgtcgaagcagaatcaatcccggaggcccagaatgtcagacctcaggaaggagaaccc
aatgggaatgaaggaggctcggccgagcgccgtcccccgactataatgctcgaccttcag
gtgcgtcgtgtgcgtccaggcgaatatcggcaaagagacagcatcgccagccgcacccgg
tcacgctcgcagaactccaacaacacttttctctatgagagtgagcgagggggttttcgc
aggaccttctcgcgctccgagcgtgccggagtgaggacctatgtcagcaccattcgaatc
cccattcgtaggatctccgacgcagggttaggagaggcaacgtcgatggctctccaatct
atgataaggcagattatgacgggcttcggcgagctaggctacctcatggattccgactca
gattcttcagattccaaccgcggtaccgggacacccgcagatacggaatccctcaccaat
ccagatgctagtaacgctgacgcatctgctgctgatgagcaaccatcggttgctgctgct
gctgctgctggagccagagagaggacagttgagacagatgtggatgagggtcttactact
ggcccacaggcttctggtggaagggctcgacttagaccccccatcaacctagaggagccc
agctcactgcctttcctacgacttgctcacttcttcctcctgaatgacgacgatgatgac
cagcctcaggggctgaccaaagaacagattgataacctctccatgcgcaacttcggtgag
agcgacgccttgaaaacctgtagcgtctgtataacggagtacgccgaggggaacaagtta
cgcaagcttccctgctctcatgagtaccacgtgcactgcatagaccgctggctctctgag
aactccacctgccccatctgtcgcagggctgtcctggtttcagccaaccgagagagcgtg
atctaa
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