Xiphophorus hellerii (green swordtail): 116714171
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Entry
116714171 CDS
T07363
Symbol
trappc11
Name
(RefSeq) trafficking protein particle complex subunit 11
KO
K20308
trafficking protein particle complex subunit 11
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116714171 (trappc11)
Membrane trafficking [BR:
xhe04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
116714171 (trappc11)
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Paralog
GFIT
Motif
Pfam:
Foie-gras_1
Gryzun-like
Gryzun
NTS_TR130
Prefoldin
Motif
Other DBs
NCBI-GeneID:
116714171
NCBI-ProteinID:
XP_032410418
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Position
23:30456758..30475261
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AA seq
1123 aa
AA seq
DB search
MAGSQWELPPELCCRPMAFVALTGLDVVYNAVHRAIWDAFCANRRADRVPISFKVLPGDH
EYPKCRTKRTSYEWYIPKGIVKTGWMNKHLNLVPGLVVLFYELDWDDPQWKEKQSECATK
VEIVRTSLQGRNTKVAVVLIQKKTPLPPGEDLVASERASALCSSCDLSGKSLFVLPHTDH
LVGYIIRLENAFYEHAQTYYYTEIRRVKSHKEFLNKTTHQLLFVRHQFKMAFLSELKQDT
QNALKYYRAAYSLVHELRAHETNMLEIKTMAGFINYKICRLCFQHNTPLDAIAQFRKHID
LCKKKIGCAELAFEHSAWMSKQFQSFGELFDEAIKLGLTAIQTQNPGFYYQQAACYSQER
KQMAQQLCQAGTTYPSPDPLDTQSGGLDFYGQRPWRQGHQSIDPTDPEKEKLGILALQIK
ERDVPHSELIIALLSNAVAQFKKYKCPRMKSHLMVQMGEEYYHAKDYTKALKLLDYVMCD
YRTERWWPLLTAILTTALHCAYLMASVKDYVIYCMELLGRASTLKEEQKSRIEKNLFKVL
MNDIPEAESECDQSSVGAARSLWTDRMALSGSNELTVEMQDYIPFIQCKARFQSPSFHVD
QPIQLQVFLRADCPHPVSFSKLTVSLSNQEYNQWCVVESSGQDSMTLLPGKPRCYNFSFV
AKTEDVGKKVEMTGVEMMLGGDSGRCVFLSWRGAGGDAASTQEALQASRSSRRWGRGNEA
RQELDWDTLTLQHSTMIISRVPRICVQLSHQPPALTNEMFCISLTVQSQEDIVAKDVKLT
AGLKPGQEAGLGQTTHVTLDGSSVCDDNAPALLTDVPLGDLTPGEKLEKCVYMKCVSTGP
RIFLFHVAYSIDTAVEGRHIVCNCHKDETVTVETVVPFEVSVKFVSTKFEPLEQVAVDIP
FLLMTDILSSSPWPLLLSSSSLQLLTVTSSTPQLQSQLQQVVLQTGESASECFCLRCPAD
TSSSNTVATGQYVVSWRRKCSSADSPLIQTTVTLPHVILESVPLYIYADLPSFGRVRDSL
PVRYHIENRTAQVQEVEIAVDPSDAFMFSGLKQVRLRVLPSTEQQMLYNYYPLMAGYQTL
PQLNISLPRCPTSSSPALRRFLPQRIFVKPQGRQPDDASIAAA
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atggcaggatcccagtgggaacttcccccagagctatgctgccggcccatggctttcgta
gctttaaccggtctggatgtggtgtacaatgcggtgcatcgcgccatctgggatgctttc
tgtgccaaccggcgcgccgacagagtccccatctctttcaaggttctcccaggagatcat
gagtatcccaaatgccgcactaagcgaacgtcgtatgagtggtacatcccaaaaggcatc
gtgaagaccggctggatgaacaaacacctgaacctggtccctggcctggtggttctgttc
tacgagctggactgggacgacccgcagtggaaggagaagcagtcggaatgcgcgactaaa
gtggaaattgtcaggaccagtctgcagggcagaaacaccaaagtggcggtggttttaatc
caaaagaaaactcctctacctccaggagaggacctggtggcgtcagagagagcctcagct
ctctgtagctcctgcgacctgtctgggaagagcctgtttgtcctgcctcacaccgaccac
ctagtgggctacatcataaggttggagaacgccttctatgagcacgctcagacctactac
tacacagagattcgtcgggtcaaatcccataaggagttcctcaacaagaccacccaccag
ctgctgttcgtcagacatcagtttaaaatggctttcctcagtgaactgaagcaagacacc
cagaacgctctcaagtactacagagctgcttacagcctggtgcatgagctcagagcgcat
gagaccaacatgctggagatcaagaccatggcaggattcatcaactacaagatctgccgc
ctgtgtttccagcacaacactcctctagacgccatagctcagttcaggaagcacatcgac
ctgtgtaagaagaagatcggctgcgctgagctggccttcgagcactctgcatggatgtcc
aaacagttccagtcttttggcgagttgttcgatgaggccataaagttgggactgaccgcc
atccagactcagaacccgggtttctactaccaacaggccgcttgttacagccaggagagg
aagcagatggcccagcagctctgtcaggcggggacgacctatccttccccagatcctctg
gacacccagagtggaggactggacttctatggacagagaccttggagacaaggacaccag
agtattgatccaacagatccagagaaggagaaactggggatcctggctctgcagattaag
gagagagatgtcccacattctgagctgataatagcacttctcagtaacgctgtggcccag
ttcaagaagtacaagtgccctcgaatgaagagtcacctcatggtgcagatgggagaggaa
tactaccatgctaaagactacaccaaagccttaaagctgctggactacgtgatgtgtgac
tatcgcacagagcgctggtggcctctgctgacggccatattgaccacagctttgcactgt
gcttatctgatggccagtgtcaaagactatgtcatctactgcatggagctgctgggcaga
gcttctaccctgaaagaggagcaaaaatccaggatagagaagaacctctttaaagtttta
atgaacgacattccagaggctgagtctgaatgtgatcaatcttcagttggtgctgccagg
tcactatggaccgaccgcatggctttgtctggatccaatgagctgacggtggaaatgcag
gactacatcccattcatccaatgcaaagcccggttccagtcacccagcttccatgtggac
cagcccatccagctgcaggtgttcctcagagctgactgtccgcaccccgtgtcattcagc
aagctcaccgtcagcctcagcaaccaggaatacaaccagtggtgtgtggtggaatcatca
ggtcaggacagcatgacgctgttaccagggaaacccagatgctacaacttcagctttgtg
gctaaaactgaagacgtgggtaaaaaagtggagatgacaggtgtagagatgatgctgggc
ggtgacagtggccgctgtgtgttcctgagctggagaggcgccggtggagacgctgcttcc
acccaggaggccctgcaggccagcaggtcgtcacggcgatgggggcggggcaacgaggca
cgccaggaattagactgggacaccttgacgctgcagcacagcaccatgatcatctccaga
gttcccaggatctgtgtccagctcagccaccagcctcctgcactcaccaatgagatgttc
tgcatcagcctcaccgtccaatcacaggaggacatcgtggcgaaggatgtcaaactcact
gccggtctcaaaccaggccaggaggctggtctaggacagaccacccatgtgaccctagac
gggtccagtgtgtgtgacgacaacgcgcccgctctgctcaccgatgtgcctctgggagat
ctgacaccaggagagaagctggagaagtgtgtgtacatgaagtgtgtgtcgaccggaccg
aggatcttcctgttccatgtggcctacagcatcgataccgccgtggaaggacgacatatc
gtgtgcaactgtcataaggatgagacggtgaccgtggagaccgtagtcccatttgaagtg
tcggtcaagtttgtgtctacaaagttcgagccgttagagcaggtagcagtggacatcccc
ttcctgctgatgacggacatcctctcgtcttcaccctggcctctcctgctgagctcgtct
tccctgcagctgctgacggtgaccagcagcacgccgcagctccagtcccagctgcagcaa
gtggttctgcagacaggagaaagtgccagtgagtgcttctgtcttcgatgtcctgcagac
actagcagcagcaacacggtggcgacaggacagtacgtcgtctcatggaggaggaagtgc
tccagcgcagacagccctctcatccagactacagtcacgctacctcatgtcatcctggag
tctgtccctctttacatctatgctgatctgccttcgttcgggcgggtcagagactccctt
ccagttcgttaccacatcgagaacaggacggctcaggtgcaggaggtggagatagctgtt
gacccatcggatgccttcatgttctctggactcaaacaggtgcgcctgcgggtcctcccc
agcacagagcagcagatgctgtataattactacccactgatggctggttaccaaactcta
ccacagctcaacatcagcctgccgcgctgtccaacgtccagcagccccgcactgagacgc
ttcctgcctcagcgtatcttcgtcaagcctcagggtcgacagccagacgacgcctccatc
gccgcagcctga
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