Xiphophorus hellerii (green swordtail): 116714202
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Entry
116714202 CDS
T07363
Symbol
limch1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
116714202 (limch1)
Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
116714202 (limch1)
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GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
116714202
NCBI-ProteinID:
XP_032410481
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Position
23:complement(3739476..3811716)
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AA seq
1114 aa
AA seq
DB search
MASPVTDLGQSHQHQPVPESAADSAFLEAQKWIEAATGRCFGDKDFRGRLENGILLCELL
SSIRPGLVKKINRLPTPIAGLDNLSVFLRGCEELGLKGSQLFDPGDLQDTSTRPAAKGSD
CSRRLKNVLITIYWLGCAANSCTSYNGPTLDLKEFEGLLSQMRKEAEAAESPQRSIRDSG
YIDCWDSERSDSLSPPRHGREDSFDSLDSFGSRSQQTPSPDVLVPRGSSDGRGSDSESDG
TPNRKMPDLHKDDMLARRTSVTELRTAMPFNQYLPNRSNQSGYVPAPLRKKNNEKEEGGH
KSWSTATSPVGGGRPCRSLSMIDMRGENEGILQPHSHIRHELMHNQYNRIKEDENHWQDD
LARWKSRRRSVSQDLIKKEEERKMMERLMSGDSCISQRRKSIKTYREIVEDKERREEELR
EMYRKARTPEEASAILQRYAQRFSISEAVLERLQLPKLLDRSLSADPSFPNSPFSLSLSS
SPTTPDPFDEAPDGPLRYLRQQSAPAPRFTSTLEAQIEEFPKDSSSHQRPQIRSRSSEPP
STRALSPKPLLTPKPYFQPRPSTDEKWNSKADGLLRVNGDIRNDASSMKSESKERDSPPL
FQASPDAPPSDASPALSPPSSPERGSPVLTKTSRRQSNMEAASVTEGSPTPTRPTSLPEE
LKQPEDSFVETEGPKDASQQEEKSTTAAQKAPPAESKSEKTEQSTGNVLQILPTEINTPN
DSAVTSMVRVSSCQESFEGAETAPSPAAPVSLGHNPLRETSSEFEISVKSPQSSSNPKSR
WEFFAPPEAAEKDLHGNVSVPVLAKARREDRWSWDPDEERKRQERWQQEQERMLQEKYQR
EQEKLKEEWEKAQREVAEEERKYHEEECRILEETVMPLTPRSSALPSPSRGGLSSTSEPQ
DTIVRSLADWERKQELLERQSRGSTESADWKRKENDRTSDISTADDSMKTGRSLVSQNSS
QAERLGHSVHNGQKLPPTSPKCSTPPKKQSGPEGTRTSRPAGERRCGPTDNNVRSSSKPL
AACPSAPDTFPPPPNRSVSGKKLCSSCSQPLGKGAAMIIETLSLYFHIQCFKCGVCKGQL
GDTTTGTDVRIRNGLLNCNQCYIRSRSAGQPTTL
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atggccagtccggttacagaccttggacagtctcatcagcatcaacctgtgccggagtcg
gccgccgactctgcgtttctggaggctcagaaatggatcgaggctgcgactggacggtgc
tttggtgacaaagatttccgaggacgtttggagaacgggattctgctgtgcgagttactg
agctccattagacctggcttggtaaagaaaattaaccgactgccaacaccaatagctggc
ctggacaacctgagtgtttttctgcgaggctgtgaggagttgggacttaaaggctcgcag
ctgtttgacccaggagacctgcaggacacatccacacgtcctgctgccaagggaagcgac
tgcagccgaaggctcaaaaatgttttaatcaccatctactggctgggttgtgctgccaac
agctgcacctcctacaacgggcccacgctggacctaaaagagtttgagggcttgctgtca
caaatgcgaaaggaggcagaggcggcagaaagtcctcaacgcagcattcgggacagtggt
tacatcgactgctgggactctgaacgcagtgactcgctctccccgccacgccacggacgc
gaagattcattcgacagcctggactccttcggctcgcgctcgcaacagactccgtcgccg
gatgtcctggtcccacgcggcagcagtgatggccgcggcagtgactcagagtccgacggc
acccctaacaggaagatgccggacctgcacaaggacgacatgttggcgcggcggacctca
gtcactgagttgcgcaccgccatgcctttcaaccagtacctccccaacaggagcaaccag
agtggatatgtgccggcaccgcttcgcaagaagaataatgaaaaggaggagggaggccac
aagagctggagtaccgctacatcacctgtagggggaggcagaccctgtaggagtctgagt
atgatcgacatgcgtggtgaaaacgagggcatcttgcagccgcacagtcacattcgtcat
gaactgatgcacaaccagtacaacagaataaaagaagatgagaatcactggcaggacgac
ctggcccgatggaaaagtaggaggaggagtgtctctcaggatctgatcaaaaaagaggag
gagaggaaaatgatggagcgactgatgtcaggagacagctgcatctctcaaagaagaaaa
agcatcaaaacctacagagaaattgtggaggacaaggagcggcgtgaggaggagctgcgg
gagatgtaccggaaagccagaactccagaggaggcgtcggccatcctccagcgctacgcc
cagcgtttctccatcagcgaggccgtcctggagcgcctgcagctgcccaagcttctggac
cgcagcttgtcggccgacccctcctttcccaactcgcccttctccctctcactctcctcc
tcccccacgactccagacccttttgacgaggcgcccgacgggccactgaggtacctgcgg
cagcaatctgcgccggcgccacggtttacgtccacactggaggcgcagattgaagagttt
cccaaagactcgagctcacaccagcggcctcagatccgctctcgctcttctgaaccaccg
tccacccgggccctgtcacccaagcctttgctgacaccaaagccttactttcagccccga
ccgtcgactgatgaaaaatggaatagcaaggcggacggtttgctacgagtaaacggcgac
atcagaaatgatgccagttccatgaagtcggagagcaaagaaagggactcccctcccctg
ttccaggcgtctccagatgcccccccatcagacgcttcacccgctctcagtccgccctcc
tcccccgaaagaggaagtccagtgttaacaaaaaccagccgcagacagagcaacatggag
gcagcctcagtcactgagggttcgcccactcccactcggcctacttctcttcctgaggag
ctaaagcagccagaggacagctttgtggagacggaaggccctaaagatgcttctcaacag
gaagaaaaatcaactactgcagctcagaaagcgccacctgcagaatctaaatcggagaag
actgaacagtccacagggaacgtactgcagattctcccaactgagataaacacaccaaat
gactcggccgtaacatcaatggtaagagtttcctcctgtcaggagtcttttgagggagcg
gagacggcaccgagtccagctgcacccgtatcgctcggacataaccccctgagggaaacg
tcatcagagtttgaaatcagtgtcaagtccccgcagtcctccagcaaccctaagtcacgc
tgggagttcttcgctccaccagaagctgcagagaaagatctacatggaaatgtgtcagtc
ccggtgttggccaaggccaggcgggaagaccgctggtcttgggacccggatgaggagcga
aagcgtcaggaaaggtggcagcaagagcaggagcgcatgctgcaggaaaaataccagcgt
gagcaggagaaactgaaggaggagtgggaaaaagcacagagggaggtggcggaggaggag
aggaagtatcatgaggaggagtgtcggatactggaggagactgtgatgcctctgacgccc
cgctcctcagcactgccctcccccagccgaggggggctctcctccacctccgagccacag
gacacgattgtgcgttcgctggcagattgggaacgaaaacaggagctactggagagacag
tctagaggaagtacagagagtgcagactggaaaaggaaagaaaatgacagaaccagtgac
atcagcactgctgacgacagcatgaagaccggcagaagcttggtgagccagaacagcagt
caggcagagagacttggtcacagtgttcacaacggccaaaagcttcctcctacgtccccc
aaatgttcaactccacccaagaagcaatcagggcctgaaggcaccagaaccagccggcct
gctggagaacgaaggtgcggccccactgataataatgtaagaagctcatcaaagcccctc
gcagcatgtccatcagcaccagacacatttcccccaccgcccaacaggtctgtcagtggg
aagaagctgtgctccagctgtagtcagcctctggggaagggagcagccatgatcatagag
actctcagcctctacttccacatccagtgctttaagtgtggggtgtgtaaaggacagtta
ggtgacacaaccacggggacagacgtccggatcagaaacggactcctcaattgcaaccaa
tgttacattcgttcccgctcggccggacagccgaccacattgtga
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