Xiphophorus hellerii (green swordtail): 116714218
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Entry
116714218 CDS
T07363
Symbol
ctnnd1
Name
(RefSeq) LOW QUALITY PROTEIN: catenin delta-1
KO
K05690
catenin (cadherin-associated protein), delta 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
116714218 (ctnnd1)
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GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT
HEAT_2
HEAT_EZ
Atx10homo_assoc
PUL
Motif
Other DBs
NCBI-GeneID:
116714218
NCBI-ProteinID:
XP_032410526
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All DBs
Position
23:15945965..15961431
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AA seq
948 aa
AA seq
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MAVCNAPTLTPWGCSVCMEQCENAAALLESVREQEVQFEQLTRALEEERRRVGLPATSPT
ALGHPFPLTQNGRLGDADIERLKLTDSYINGTQYRMVDPAHGALDDGYTPEDESQEVHSV
FSEEGTTRINNGMKKPISRTVPPSQSSMDGMLSPAMGVYSATLDRPYRPTGVGDYPTATV
PRNYHYAPVGGYEDYRPGPPSEAYTSLSRGSHMDERYRPVDGYRTLDSGYRAHSRQQLDP
YAAQPQVSRMRALGSALEMRYGHGHYGLEDDQRSMGYDDYGMGPPPMHPGGYGTMPRLGP
GPGPGIDRRRLRSCEDTLDGDVGGVDPYAWGVPTTLERDSMVSLDSILRKGPPTWRQPDL
PEVIAMLNYRLDPVKANAAAYLQHLTFKNDKVKSEVRRLKGIPALVSMLDHPSKEVHHSA
CGALKNISYGRDADNKIAIKNCDGVTALVRLLRKTHDQDLTDTITGTLWNLSSHDSVKME
IVDHALHALADEVIVPHSGWEKGGGEESSKPRHLEWDTSLTNTAGCLRNVSSERSEARRK
LRECTGLVDSLMYIVQSQLNHKDVDNKLVENCVCLLRNLSYQVHHEIPGCENYKELIPVN
QGPASANKGGCFGSRKGKDEWFSKAKKDGDDGSPESYXFPKRTIPAKGYELLYQPEVVRV
YTSLLKESKNPSVLEAAAGAIQNLCAGRWTFGRYIRAMVRLEKGLPIVTELLSHNNDRVV
RAMSGALRNLAIDNRNSELLGEHALPHLVAVLPGGQNQSRRNLSEETTVSVLSTLTEVLG
NSVEAAKKLRLASGIERLVLISKDGTRTDREVRGVAQVLQLVWAHKELRRPLEKDGWKKT
DFMVNLNPNTTTTNGPSTRANGTYEDSTTPLLDRGDKRDLIPLNDLGPDSYSTLDQKERR
HTLDETTDTLPRGVYGSRKGSLPLLDSYDEKLIVCITQTGPPLPYHCY
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctgtaacgcccccactctcaccccttggggctgttcagtgtgtatggagcag
tgtgagaacgcagcggctctgctggagtcagtcagggagcaggaggtgcagtttgaacag
ctgacccgggctctggaggaggagaggaggagagttggcctccccgccaccagccccacg
gccctgggtcaccccttccctctcacacagaacgggcgtttaggggatgcagacatagaa
cgtctgaagctgactgactcgtacataaacggcacgcagtacagaatggtggaccccgca
cacggagctcttgatgacggctacacacctgaggatgaatcccaggaagtacactctgtc
ttttctgaggaaggaaccacccggataaataatgggatgaagaaaccaatctcgcgcacg
gtcccgccctctcagtcgtctatggatgggatgttgtcacctgctatgggggtctacagc
gccacactggacaggccttacaggcccacgggggttggggactaccctaccgcgacagta
ccccgaaattatcactatgctccagttggcggctacgaagactaccggccaggtccgccg
tcggaggcatacaccagcctgagccggggctcgcacatggatgagcgctacaggcccgtc
gatggctacagaactctggactctggctacagggcccacagccgccagcagctggacccg
tacgcggcgcagccccaggtgagtcgcatgagggcgctggggtcagcgttggagatgagg
tatggccacggccactacggactggaggatgatcagcgcagcatggggtatgacgactat
ggcatggggcctccacccatgcaccctggaggctacggtacaatgcctcgccttgggccg
ggcccgggtccaggaatagacagacgcagactcagaagttgcgaagacactttggacggt
gatgtgggaggagtcgacccttatgcatggggggttcccacaacgttggagagggatagc
atggtttctcttgacagcatactgagaaagggccctcccacttggaggcagccagatcta
ccagaggtgatcgccatgctgaattaccgtctggatcctgtcaaggccaacgccgctgcc
taccttcagcatctcactttcaaaaatgataaggtgaagtcggaagtgcgccgcctgaag
ggaattccagccttggtgtcgatgttggatcatcccagtaaggaggttcatcattcagcc
tgcggcgctctgaagaacatttcatacggacgagacgcagacaacaagatcgccatcaaa
aactgcgatggtgttactgccctggtcaggctgctgaggaaaacccacgaccaggacctc
actgacacgatcacaggcaccttgtggaacctctcctcccatgattcggtgaagatggag
atagtggaccacgctctgcatgctctcgccgatgaggtgattgttcctcactcaggctgg
gagaaaggcggaggcgaggagagctccaaaccacgacatttggagtgggatacatccttg
accaacactgctggctgccttaggaatgtcagctcagagcggagtgaggccagacgaaag
ctgagggaatgcacagggctggtggattctctcatgtacattgtccagtcacaactcaac
cacaaagatgtggataataagctggtggagaattgcgtctgccttctgaggaacctgtcc
tatcaggtccaccatgaaatccccggctgcgaaaattacaaagagctgattcctgtcaac
cagggccccgcctcagccaacaagggaggctgctttggttcacgaaagggcaaagatgag
tggttttccaaagcaaagaaggatggggatgatggaagtccagagtcttacngatttcca
aagaggacaatacctgccaaaggttatgagctgctgtaccagccagaggtggtccgtgtt
tacacttctctgctcaaagagagcaagaacccctcagtgctggaggcggcggccggcgcc
atccagaacttgtgtgccggacgatggacctttggtcggtacatcagagccatggtgcgt
ctggaaaagggcctccccatcgtgacagaactgctctcccataataacgatcgtgttgtt
cgggcaatgtctggagccttgaggaacctcgccatcgacaaccgcaacagtgagctcttg
ggcgagcatgctctgcctcacctggtggctgtcctgcctggagggcagaaccagtctagg
cgcaatctgtcagaggaaaccacggtgtcagtactgagcacgctcactgaggtgctcggc
aacagcgtggaggcagcaaagaaactgagactcgcatctggcattgagaggctggtgctc
atcagtaaagatggcacccgcactgaccgtgaggtgcgaggagtggctcaggtgctgcag
ctcgtctgggctcacaaagagctgcgccggccgctggagaaggacggctggaagaagacg
gacttcatggtgaacctgaacccgaacaccacgaccaccaacggaccgagcaccagagcg
aacggcacctacgaggacagcaccacgccgctactggacagaggagataagagggatcta
attcccttgaatgatcttggccctgattcctactctacactggaccagaaggagaggaga
cacactctggacgaaaccacagacactttaccgcgaggggtgtatgggagcagaaagggc
tccctgcctctgttggactcctacgatgaaaaactcatagtgtgcatcacccagactggg
ccgcccctgccctaccactgctactga
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