KEGG   Xiphophorus hellerii (green swordtail): 116714245
Entry
116714245         CDS       T07363                                 
Name
(RefSeq) LOW QUALITY PROTEIN: F-box/WD repeat-containing protein 11-like
  KO
K03362  F-box and WD-40 domain protein 1/11
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe04114  Oocyte meiosis
xhe04120  Ubiquitin mediated proteolysis
xhe04218  Cellular senescence
xhe04310  Wnt signaling pathway
xhe04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    116714245
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    116714245
   04340 Hedgehog signaling pathway
    116714245
 09140 Cellular Processes
  09143 Cell growth and death
   04114 Oocyte meiosis
    116714245
   04218 Cellular senescence
    116714245
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xhe04121]
    116714245
   03036 Chromosome and associated proteins [BR:xhe03036]
    116714245
Ubiquitin system [BR:xhe04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     116714245
Chromosome and associated proteins [BR:xhe03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     116714245
SSDB
Motif
Pfam: WD40 Beta-prop_TEP1_2nd WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_C WD40_CDC20-Fz EIF3I WD40_MABP1-WDR62_2nd Beta-TrCP_D Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_EML WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 ANAPC4_WD40 F-box-like Beta-prop_DCAF12 WDR90_beta-prop_4th Beta-prop_IP5PC_F WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_DCAF4 WD40_like Beta-prop_HPS5 Beta-prop_IFT140_1st F-box Beta-prop_WDR11_2nd Beta-prop_Nup120_160 Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_VPS8 DUF6188
Other DBs
NCBI-GeneID: 116714245
NCBI-ProteinID: XP_032410561
LinkDB
Position
23:complement(17161643..17180452)
AA seq 562 aa
MEPEMEDKTVELMCSVPRSLWLGCSSVAESLCALRCLQSIPSTRAHNQTTSGMESQTLVD
DLSPKKTTMVKLTNGPVIGSRKRPSEGNYEKEKEHCIALFDQWSEADQVEFVERLISRMC
HYQHGHINSYLKPMLQRDFITALPAQGLDHIAENILSFLDARSLCAAELVCKEWQRVISE
GMLWKKLIERMVRTDPLWKGLSERHQWEKYLFKNRTSEIPPNSYYHSLYPKIIQDIETIE
ANWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKQTLECLKVLTGHT
GSVLCLQYDERVIVTGSSDSTVRVWEVTTGEVLNTLIHHNEAVLHLRFANGLMVTCSKDR
SIAVWDMASPTDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLN
GHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGA
YDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFL
NVSPNGQSEGRSPSRTYTYISR
NT seq 1689 nt   +upstreamnt  +downstreamnt
atggagccggagatggaagacaaaacggtggaactgatgtgctctgtgcctcgctctctc
tggctgggctgctcctcggtggctgagagtttgtgtgcactcaggtgcctgcagagcatc
ccctccacccgggctcacaaccagaccacgtcagggatggagtcacagaccttagtggac
gacctgtcgccaaagaagactacaatggtgaagcttactaacggtcctgtaatagggtct
cgcaagcgtccatcagaagggaactatgagaaggagaaggaacactgcatcgccttgttt
gaccagtggtcagaggccgaccaagtggagtttgtcgagcggctgatatcccgtatgtgc
cactaccagcacggccacatcaactcctacctcaaacccatgctgcagagggatttcatc
actgcattgccagcccaaggcttggatcacattgcagagaacatcctgtcttttctggat
gcacgttcgctttgcgctgcagagctggtatgtaaagagtggcagagggtaatctctgag
ggtatgctgtggaagaagctcattgagcgaatggtccggaccgacccgctttggaaaggc
ctgtctgaaagacaccagtgggagaaatatttgttcaagaaccgcacatcagaaatcccg
cccaactcctactatcactctctttatcctaagatcattcaagacatagagacaattgag
gctaattggcgatgtggcagacacaacttgcaaaggattcagtgtcgctcagaaaacagt
aaaggtgtttattgtctccagtacgatgacgagaagatcatcagtggccttagggacaac
tccatcaagatctgggataaacaaacactggaatgtctgaaggtactgaccggccacaca
ggctcagtattgtgtctccagtatgatgagagagtcatcgtcactgggtcttctgactcg
actgtcagggtttgggaagtcacgacgggtgaggtactcaacacgctgatccatcacaac
gaggctgttcttcacctgcgattcgcaaatggtctcatggtcacctgctccaaggaccgc
tcgattgcagtgtgggacatggcctcgcctactgacatcagcctgcggcgcgtccttgtt
ggacatcgtgctgctgtcaatgtcgttgactttgatgataaatatattgtgtccgcctca
ggggaccgcaccatcaaggtgtggagcaccagcacctgtgagtttgtgcgcactctaaat
ggtcacaagcgggggattgcctgtttacagtatagagatcgtctggtagtcagcggctca
tctgacaacacaatccggttatgggacatcgagtgcggggcatgtttgcgagtgctggaa
ggtcacgaggagttggtgcgctgcattcgcttcgacaacaaaaggatcgtcagcggagcc
tacgatggcaaaataaaagtgtgggacctgcaggcagcacttgacccacgagcccctgct
agcacattatgtctgcggactctagtggagcactctggccgtgttttccgcctgcagttt
gatgagtttcagatcatcagcagttctcacgacgacaccattctgatctgggatttcctg
aacgtctcacctaatggccagtcagagggacgatctccgtcccgtacctacacgtacatt
tctagatag

DBGET integrated database retrieval system