Xiphophorus hellerii (green swordtail): 116714300
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Entry
116714300 CDS
T07363
Name
(RefSeq) protocadherin-10-like isoform X1
KO
K16499
protocadherin delta 2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116714300
Cell adhesion molecules [BR:
xhe04515
]
Cadherins
Protocadherins
116714300
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
116714300
NCBI-ProteinID:
XP_032410668
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Position
23:complement(31941957..31973852)
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AA seq
978 aa
AA seq
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MYLFLFYPSALAFPVMIVVLIALCFTDGALSQIRYSVPEEAEHGTLVGNIAEDLGLDLTK
LASRRFQVVPSSRTPYLEVNLENGVLFVNEKIDREQICKQSASCQLNMEVFLENPLELFR
VEIEVVDINDNPPSFPETDITVEISESATPGTRFPLESAFDPDVGSNALRTYDITTNNYF
YLDVQTQTDGNKFAELVLEKPLDREQQAAHRYVLTAVDGGQPPRTGTALLVVKVLDSNDN
VPVFEQPVYTVSLSENVPVGTLVIQLNATDLDEGLNGEIVYSFSNHISSRVKELFGIDPR
TGRIEVRGEVDFEESSLYQIFVQAKDLGPNAVPAHCKVLVKVADLNDNAPEITFSTVKES
VSEKAAPGTVIALLSVTDRDAEENGQIHVEILGDVPFKLKSSFRNYFTIVTDGLLNREQA
DSYSVTVVARDKGTPSLASSKSIRVQVSDENDNAPTFTQSVYDVYVTENNVPGAYIHAVT
ALDPDIGQNALITYSILECDIQGMSVKTYVSINEETGYLYALRSFDYEQLKDFTFMVRAK
DSGAPELSSNATVKVIIVDQNDNAPLVLAPLGKNGTAKEPLPRSAEPGYLVTRVVAMDAD
DGENARLSYSIQRGNDNGMFRMDWRTGELRTARRVSAKRDPHQQYDLVIEVRDHGQPPLS
SSASILVMLVDSMAEGRGVGDKVGTSKAKDGALDLTLILIIALGSVSFIFLLVMIVLAVR
CQKDKKLNIYTCLTSDCCLGCSSCCSRQGRSRKKKLSKADIMLVQSTVNVSGPGTAQVPV
EESGSFGSHHQNQNYCYQVCLTPESAKTDLMFLKPCSPSRSTDTDHNPCGAIGSGYTDQQ
PDIISNGSILSNETKHQRTELSYLVERPRRVNSSAFQEADLVSSKDSGHGDSEQGDSDHD
ATNRGHSSGADLFSNCTEECKALGHSDRCWMPSFVPSDGRQGLDYRSNLHVPGMDSVPDT
ERGRGFASSFRVDIPETA
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgtatttatttcttttttacccaagtgcacttgcttttccggtcatgattgtggttttg
atagcgctgtgttttacggatggagcgctctctcagatccgctactctgtcccggaggag
gcagagcatggcacgctggtggggaacatcgctgaagacctggggctggaccttaccaaa
ctggcctcccggcgattccaggtagtgcctagttccagaacgccatatctggaagtgaac
ctcgagaacggcgtcctgttcgttaacgagaaaatcgatagggagcaaatctgcaagcag
agtgccagctgccagctcaacatggaggtgttcttggagaacccactggagctgttcaga
gtcgaaattgaagtggtggacattaacgacaacccaccgagcttcccggagacagacatc
acggtggaaatctcagagagcgcaacccctggcacccggttccctttggagagtgcgttc
gacccggacgtgggctccaacgcgttgcgcacatatgatatcacaaccaacaattacttt
tacctggacgtgcagacccaaaccgacggaaataaatttgcagaacttgtcctggagaag
cctctggacagggagcagcaggcagcgcacaggtacgtgctcactgcggtggacggcgga
cagcctcctcggactggcaccgcgctgctggtagtcaaagtgttggactctaacgataat
gtgcccgtgtttgagcagcccgtctacacggtgagtctctcggagaacgtaccggtgggc
acgctggtcatccagctgaacgccaccgacctagatgagggactgaacggggaaatagtt
tactccttcagcaaccacatctccagtcgcgttaaggagctgttcggcatagacccgcgg
accggacgcatcgaagtccgtggggaggtggatttcgaagagagcagcctctatcagatc
tttgtccaggctaaggacctcgggccaaacgccgtgcccgcgcattgtaaagtgttggtc
aaagtggcggacttgaacgacaacgcaccggaaatcaccttcagcactgtcaaggagtcg
gtgagtgaaaaagccgctcccggtaccgtcattgccctgttaagtgtgacggaccgtgac
gcagaggagaacggacagatccacgtggaaatcctgggtgatgtaccgttcaaattaaag
tcctctttcaggaattacttcaccatagtgactgatgggctcctgaaccgggagcaggca
gactcctactccgtgaccgtggtggcgcgggataaaggaactccttcgctggcttctagt
aagtccatccgcgtccaggtgtcagatgaaaacgacaatgcgcccactttcactcaatcc
gtttatgatgtgtatgtgacagagaacaacgtaccaggagcgtacatccacgctgtaacg
gccctggaccctgatatagggcagaacgctctcattacttactccatcttagagtgtgac
attcagggcatgtcagttaaaacctatgtgtctatcaacgaggagacaggatacctttac
gcactcaggtcttttgattatgagcagctaaaagatttcacctttatggtcagggccaag
gactccggtgcccctgagctttcctctaatgcaactgtcaaagtcataattgttgatcag
aatgataatgcgcccctggtacttgcgcccctggggaaaaatgggactgcgaaggagccc
cttcctcgctccgctgagccaggctacctggtgactcgtgttgtggccatggatgcagat
gatggtgagaatgcccgcctgtcctacagcattcagaggggtaacgacaacgggatgttt
aggatggactggaggactggtgaactcaggaccgcaaggcgggtgtcagctaagcgagac
ccccaccagcagtatgacctggtgattgaggtgagagaccatggccagcctccattgtcc
tccagtgccagcatactggtgatgctggtagacagcatggctgaaggccggggtgtggga
gacaaagtgggcaccagcaaggccaaagatggtgctttggacctcaccctcatcctaatc
attgccctcggttctgtgtccttcatcttcctccttgtgatgattgtgctggccgtgcgc
tgccagaaggacaaaaagctcaacatttatacctgcctaactagtgactgctgtcttgga
tgcagctcctgctgctcacggcagggtagatcccgcaagaaaaagctcagcaaggcggac
atcatgcttgtgcaaagcactgtcaatgtcagcgggcctggaacggctcaagtccctgtg
gaggagtctgggagcttcggctcccaccatcaaaaccagaactattgctatcaggtatgt
ctgactccagagtctgccaaaactgacctcatgttcctaaagccgtgtagtccatctagg
agcacagacaccgatcacaacccgtgtggtgccatagggtcagggtacacagaccagcag
cctgacatcatatcaaacggcagcattttatcaaacgagaccaaacaccagcgaaccgaa
ctcagctacctggtggagaggccgaggcgtgtcaacagctcagcattccaggaggcagat
ctggtcagctctaaagacagtggccacggagatagcgagcaaggagacagtgaccacgat
gccacaaatcgaggacattcctctggtgctgatctgttttctaactgcacagaagagtgc
aaggccctggggcactctgatcgctgctggatgcccagctttgtgccctctgatgggcgc
cagggtctagactaccgcagcaacctccatgttcccggcatggactcagtcccagataca
gagcgaggaagagggtttgctagctccttccgtgtggacataccagagactgcatga
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