Xiphophorus hellerii (green swordtail): 116714334 Help Entry 116714334         CDS       T07363                                  Symbol synpo Name (RefSeq) synaptopodin isoform X1   KO K21112   synaptopodin Organism xhe  Xiphophorus hellerii (green swordtail) Pathway xhe04530   Tight junction Brite KEGG Orthology (KO) [BR:xhe00001]  09140 Cellular Processes   09144 Cellular community - eukaryotes    04530 Tight junction     116714334 (synpo) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Calsarcin Motif Other DBs NCBI-GeneID:  116714334 NCBI-ProteinID:  XP_032410723 LinkDB All DBs Position 23:22005264..22025122 Genome browser AA seq 1177 aa AA seqDB search MKTTESLGLGQSGGIHGPSVNPPSFHTISHITHGLLGCHPTPLLAINQKKDNIRQDLSRS ASLSEKELKEARLKSHIIAAQLTIPSNSGSSSRGVQLFNRRKQRVNAFTLESCGQGSEVD KTENVKSDSLSNKQTWAERSCEDKDTDLNLNNNKLHFLPPASSPSTGGIMDEENKNFIKD EDTENYDIKERHFLPVKEEPEEEDDIKDKIHEVLEDDARHQTPLGSNDSHPAVMAHVERK TETNEGHPAVVPSEKLLNGCHSTSGSERISLVSPSKQTPAFLNRTARPFFSPPTVLSPDS VNPATDIPPPPSYATPPLPSSTQPVTFSPPPPPPSYPTPPLPAFTNQPPQTFYSGPLPMS PPMSSPCLSPSNFPVSQHPPAPHCGPLTAPKPSTFVPQSTGERKLITPIKTGILEEGAAR RANKKSMFTFKEKPVVAPNPELLSLVQGADERKKHGHRSVPEPALEEELLALGAEASNFL AKAEEKTAGARAPEWASCLKSSKTRPRLDHRPEQSLTNVSGKGAELFAKRQSRMEKYVVE NQNPGQIRSPSPTMSLPPSWVYPSNMPGRVKAIAKNSEVSAQISQNLKAQQAVKQKPKTK VAVPEPVPEPPTTLENGCSKIEMDLARHRPYQLNSSLFVFNPVKDPISTLPRGAPQVKNL LSSQSFSRHTSLPNTSPSYYGSMSPQLPLTSPRGSEYPANPASPHARITSLMSPFSPERV SSPRSGVQAPKPTFSAKKAGITPQESEESSPVEITGETSRATSTPSLTRRFSSPANQATR KWISSSQTSQSPTTTSGSICSVKSPVNLSSNARSQSFMSSQNSQFSSVNSTSASRPSQAA TVTSPCSPPWGSRCQSPAVSQSSTTTSIPFSKPSENSKTHYPISPPWGSRCQSPSVSNNN KTSSASAFSVSRPSITSVATSTISPPWGSRCQSPAVSQNTQSSTFSPGPTCRPSQTPPWG SRCQSPSVSQNNQSSAVSVSPSRPLQIFAATSPVCPPWSPRSQSPALFQSSSSFQSTNPL HTTATASSPRQQKDNRCTSQIVNNLDSKANHRLLAKNIINAAKRKNSPSPGALSSHGLPI SPVGNFQNDWQKPPISPFQQRSLGAQSPTFTSPPVTPTQRICSPVRLYNTRSLTDSDASV ESEDSGLRSPGLHSYNTCPRGWGGSLRVKRSTVSTDL NT seq 3534 nt NT seq  +upstreamnt  +downstreamnt atgaaaaccactgagagtttaggtctcggtcagtctggtgggatacacggcccctctgtt aatcccccgtctttccataccatttcacatatcacccacgggctcctgggctgtcatccc actcccctcctggccatcaaccagaagaaagataacatccgacaggatctgagcaggagt gccagtttatcggagaaagagctgaaggaggcacggctgaagagtcacatcattgctgct cagctcaccatcccctccaactccggctccagctccaggggtgtgcagctttttaatcgg cgcaagcagagagtgaacgccttcacactcgaaagctgcggacaggggtcagaggtggac aaaactgagaatgtgaaaagtgattccttgtccaacaagcaaacctgggcagagagaagc tgtgaggataaggacacagacctgaacttaaataataataagttacactttttgccacct gcaagcagcccttcaactggtggcataatggatgaagaaaataagaattttatcaaagat gaagacacggagaactatgatatcaaggaaagacatttcctccctgtcaaagaagagcca gaagaagaggatgacataaaggataaaattcatgaggttctagaggacgatgctagacac caaactcctctgggaagtaatgactctcatccagctgtgatggcacatgttgaaaggaag acagaaacaaatgagggccacccagcagttgttccctctgaaaagcttcttaatggctgt cacagcacctctggttcagagaggatttccttagtctcaccctccaagcagacgccagcc ttcctcaacagaacggctcgacctttcttctcaccaccaactgtcctctctccagattca gtcaatcctgctacagacatcccacctcccccgtcttatgccactcctcctctcccttct tccactcaacctgtcacattctctcctccacctccaccaccatcatacccaacacctcct ctgccggccttcacaaaccaacctccacagacgttctactctggtccacttccaatgtct cctcccatgtcatctccatgcctttcgccatccaactttcctgtttcccagcacccacct gcaccccactgtggccctctgacagctccaaagccttccacctttgttccacagtccact ggagaaaggaagctgataacaccaatcaaaacaggaatactagaagaaggcgcagccagg agggcaaacaagaagtcaatgtttacatttaaagagaagccagtggttgctccaaaccct gagctgctctctctggtgcaaggagcggatgaaagaaagaaacatggacacagatctgtc cctgaaccagcacttgaagaggagttactggctttgggagcagaagcttctaacttcctt gcgaaagcagaggaaaagacagcgggagcaagagccccagagtgggcatcctgtctcaaa agctcaaagaccagaccaaggctagaccatcgtccagagcagagcctcacaaatgtgtca ggcaagggggctgaattgtttgccaagcgtcaatcaaggatggagaaatatgttgttgag aatcagaatccaggacaaattaggtctccctcccccacaatgtcgttaccaccatcctgg gtttacccatcgaacatgccaggaagggtcaaagccattgccaagaactccgaagtgagc gcacagatttcgcaaaatctaaaggcccagcaagccgtcaagcaaaaaccaaaaacaaaa gttgcagtaccagagccagttccagaaccaccaactactttagaaaatggttgctccaag atagagatggacctcgcaagacaccgtccctatcagctcaactcttccctctttgtcttc aacccagtcaaggacccaataagcacattacccagaggagcaccacaagtcaagaaccta ctcagcagccaaagtttttctagacacacttctctacctaacacttcaccatcttattat ggtagtatgtcacctcagttgcctctcacctccccaagaggatcagaatacccagcaaat ccagcttccccacatgcgaggatcacttctttgatgtctcctttttctccagaacgagtt tcctcccctcggtctggagttcaggcaccaaagccaacgttttctgccaagaaggcagga attacaccacaggaatcagaggagtcatcccctgttgaaattactggtgaaacatccagg gcaaccagtacacctagcctaaccagacgtttcagcagcccagcaaaccaagcaactaga aaatggatctccagctctcaaacaagccagtcaccaaccaccaccagcggatctatctgt tctgtcaagtctcctgtcaatttgtccagtaatgcaagatcccaatcttttatgtcgagt cagaatagccaattttcctctgttaattccacttctgcatccaggccctcccaagcagct acagtcacttctccatgctctccaccttggggttccagatgtcagtccccagctgtcagc cagtcctccactactacctccattcctttttccaaaccctctgaaaactctaaaacccat tatcctatttctcctccttggggttcaagatgccagtccccatctgtgagcaataataac aagacctcctctgcttcggctttctctgtgtccagaccctccatcacatctgtcgccaca tctacaatctcccctccctggggatcaaggtgccaatccccagcagtgagtcagaatacc caatcttccaccttttcccctggtcctacatgcagaccttctcaaactcctccttgggga tcaagatgccagtcaccttccgtaagccagaataatcaatcctccgctgtctctgtttcc ccatccagacctctgcaaatatttgcagccacatctcctgtttgccctccatggagcccc cgctcccaatcacctgcactgtttcaaagcagctcatcctttcaatccactaatcctctg cacacaacagccactgcctcctctccacgacaacaaaaagacaatcgctgcacgtcccag attgttaacaacctagactcaaaagcaaatcaccgtctccttgcaaagaatattataaat gcagccaaacgtaaaaacagcccctcccctggagcactgagcagtcacggcctccccatt tcacctgtgggaaactttcaaaacgactggcaaaaaccaccaattagccccttccagcag aggtccttgggtgcacagtctcccaccttcaccagccctcctgtcaccccaactcagaga atctgctcacctgtaaggctctacaacacccgttctctgaccgactcagatgcctctgtt gagtccgaggactctgggctcaggtcgcctggcctacactcctacaacacctgcccccgt ggctggggcggcagcctgcgggtcaaaagaagtactgtctccactgacctgtga

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