Xiphophorus hellerii (green swordtail): 116714389
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Entry
116714389 CDS
T07363
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04120
Ubiquitin mediated proteolysis
xhe04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116714389 (syvn1)
04120 Ubiquitin mediated proteolysis
116714389 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116714389 (syvn1)
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116714389 (syvn1)
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116714389 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
zf-Nse
FANCL_C
Endonuclease_7
Motif
Other DBs
NCBI-GeneID:
116714389
NCBI-ProteinID:
XP_032410825
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All DBs
Position
23:26814326..26825262
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AA seq
636 aa
AA seq
DB search
MVRAALVTATSMALTGAVVAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKI
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHLRVLSLLGLLAVMDFLFVNHACHSIITRGASVQLVFGFEYAI
LLTMILTTFIKYVLHTVDLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNNNQAQAPAPPPAPAPAAPANAP
AAPAPNVAPGMLPGFPPGVFPFWGPFPAVPPPAAVAPPAAPAAADAPPSSTDTTQAAGTS
QPTSAAADAATSSAVAAAAPGSAIPGFPFSFPPPPFPAAPWLPMPPPPPFVSSMPPPPPS
LSRLTEEELRELEAEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLAPPRPEGGA
AEAGGVNREAASAGAESPATERDSSTSDPVGGATVSSQPADSTSSASDAERKENWDEGAA
DDENGEPSAAELRRRRLRKLETSPSSPTSPSPPPDN
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagcagccctggtgaccgccaccagcatggcgctgaccggcgccgtggtggcc
cacgcctacctgctcaaacatcagttctacccgaccgtcgtgtacctcaccaaaagcagc
cccagcatggcggttttgtacattcaggcgtttgtgctggtgttcctgctggggaagatc
atgaggaaggtgttctttggccagctgagggctgcagaaatggagcacctcatcgagcgc
tcctggtacgcggtgacggagacctgcctggcgttcaccgtgttcagggacgatttctcc
cctcgcttcgtcgccctcttcaccctcctgctcttcctcaagtgtttccactggctggcc
gaggaccgggtggactttatggagaggagtccgaacatatcctggctttttcacttgaga
gttttatctcttctaggacttctggctgtcatggacttcctgtttgttaaccatgcctgc
cacagcatcatcaccagaggagcttcggtccagctcgtttttggctttgagtacgccatc
ttgttgaccatgatcctgacgaccttcatcaagtacgtcctgcacaccgttgaccttcag
agtgagaacccctgggacaacaaggccgtctacatgctctacaccgagctcttcacaggt
ttcatcaaggttctcctctacatcgccttcatgaccatcatgataaaggtccacaccttc
cccctgttcgccatccggcccatgtacctggccatgaggcagtttaaaaaagccgtaacc
gacgctataatgtcaaggagagcaatccgcaacatgaacactctatatcctgatgcgact
cctgaggatctgcaggcctcggacaacgtctgcatcatctgtagagaggaaatggtcacc
ggagccaagaagctaccctgtaatcacattttccactccagctgcctgcgctcctggttc
cagaggcagcagacctgccccacctgccgcatggacgtcctcagggcatccaacaacaac
caggcccaggccccggccccgcccccggctccagccccggcggcgcccgccaacgccccg
gccgctccggccccaaacgtcgctcccggcatgctgccaggcttccctccaggagttttc
cctttctggggtcctttccctgcagttcctccacctgctgctgttgctccacctgcagct
cctgctgcagctgacgctccgccaagcagcacggacacaacgcaggccgctggcaccagc
cagcccacttcagctgctgcagacgctgctacgtcgtcagccgtcgccgccgccgctcca
ggatcagcaatcccaggattccctttctccttcccgcctcctcctttccccgctgcgcca
tggctgccgatgcctccgcctcctccctttgtgtcgtccatgcctcctcctcctccgtcg
ctctctcgcctgacggaggaggaactgagggagctggaggccgaagggaggaggggcctg
gaggccaggctgcagtgtctccagaacatccacaccctgctggacgccgccatgctcaac
atccaccactacctcagcaccgttgccacgctcgcccctcctcggcctgagggtggcgcc
gcagaagccggcggagtcaatcgggaggcagcgtccgctggcgcagaaagtcccgccacg
gagagggactcttccacctctgatccagtaggtggagccacagtctcctctcagcccgct
gactccacctcctctgcctcagacgcagagaggaaggagaactgggacgaaggagcggcg
gacgacgagaacggagagcccagcgccgccgagctgaggcgccgccgtctccgtaagcta
gagacgtcgccttcgtcgccgacttcgccgtcgccacctcccgataactga
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