Xiphophorus hellerii (green swordtail): 116714489
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Entry
116714489 CDS
T07363
Symbol
pcgf3
Name
(RefSeq) polycomb group RING finger protein 3
KO
K11488
polycomb group RING finger protein 3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
116714489 (pcgf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116714489 (pcgf3)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
116714489 (pcgf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-rbx1
zf-RING_UBOX
zf-C3HC4_4
zf-RING_4
DUF3337
TRAF3_RING
GAGA
zf-Nse
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
116714489
NCBI-ProteinID:
XP_032410995
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All DBs
Position
23:5199013..5250893
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AA seq
249 aa
AA seq
DB search
MAVLGNPDMLTRKIKLCHINAHITCRLCEGYLIDATTVTECLHTFCRSCLVKYLEENNTC
PTCRIVIHQSHPLQYIGHDRTMQDIVYKLVPGLQEAEIKKQRDFYQKLGMEVPGDIKGEL
CNMKTHLDQRNGDTKSEDTANKEAGEEKPEEDNDYHRSDEQVSICLECNSSKLRGLKRKW
IRCSAQATVLHLKKFIAKKLNLTSFNELDILCNEEILGKDHTLKFVVVTRWRFKKSPLLL
HYRPKMDLL
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggcggtattagggaaccccgacatgctgacgaggaagataaagctgtgtcacatcaac
gcccacatcacatgtcgcctgtgtgagggctacctgatcgacgccaccaccgtcaccgag
tgcttacacaccttctgcagaagctgccttgtaaagtatctggaggagaacaacacgtgc
cccacgtgtaggattgttattcatcagagccatccactgcagtatatcggccatgaccga
acaatgcaagacatcgtctacaagctggtaccgggacttcaagaggcggagataaagaag
cagagggatttctatcagaagttgggcatggaggtgcctggggacattaaaggagagctg
tgcaacatgaagactcatctagatcagcgaaacggcgacacaaaatcagaagacacggcg
aataaggaggccggagaggagaagccagaggaggacaacgactatcaccgtagtgacgag
caggtcagcatctgcctggagtgcaacagcagcaaacttcgaggtctgaaacgtaaatgg
atccgctgctcagcacaagccaccgtcctccacctcaaaaagttcatcgccaaaaagctc
aacctgacatcgtttaacgagctggacattttatgcaacgaggaaatcctgggaaaggac
cacactttgaaatttgttgttgtgacaagatggagatttaagaaatctccactcctgctc
cattacagaccgaagatggacctgctgtag
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integrated database retrieval system
