Xiphophorus hellerii (green swordtail): 116714579
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Entry
116714579 CDS
T07363
Symbol
tbc1d9b
Name
(RefSeq) LOW QUALITY PROTEIN: TBC1 domain family member 9B
KO
K19951
TBC1 domain family member 8/9
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116714579 (tbc1d9b)
Membrane trafficking [BR:
xhe04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
116714579 (tbc1d9b)
Endosome - Golgi transport
Rab GTPases and associated proteins
116714579 (tbc1d9b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_7
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
116714579
NCBI-ProteinID:
XP_032411118
LinkDB
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Position
23:complement(604862..614359)
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AA seq
1222 aa
AA seq
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MWIEPEEVLLAGALWVSERANPFFILQRRRGHGRGGGLSGLLVGTLDVVLDSSARVAPYR
ILLQTADSQIYWNIACGSSRKEITEHWDFLESNLLQTISIFDNDEDVITFVKGKISGIIA
EENRLKRSEEQEENSGKFLEAELKMRKLFGMPEEEKLVNYYSCSYWKGRVPRQGWLYLSI
NHLCFYSFLLGKEVTLVVQWTEVTQLEKNATLVFPESVRVSTRNAEHFFSMFLNVNDTFK
LMEQLANIAMRQLLDNEAFAADRSLPKACKTLKNVSALKRDFDARAKNERYRSMFRLTQD
ERLDGHTDCTLWTPFAKMHVVGQLFISNNYICFSSREEDLCQLIIPLREVTIVEKADSSS
VLPCPVSISTKNKMNFLFANLKDRDFLVQRISDFLQRTPDGSWSDTNPLSLIGSSVRQAW
LSEPCGSGSVSCLSVPRAPPASPNPQDPTPSTRGAITTAAPTAQQGLLRLFQQDGPEDLG
PKAMKERMKEEAWNIHFSEFGRGVCMYRTSRTRELVLNGIPERLRGELWLLFSGAQNEMA
SHPGYYGDLVEQATGLCSLATEEIERDLHRSMPEHRAFQNETGIAALRRVLTAYAHRNPN
IGYCQAMNIVTSVLLLYGTEEEAFWLLVALCERMLPDYYNTRVVGALVDQAVFEELTRAF
LPPLYDHMQALGVITTISLSWFLTLFLSVMPFDSAVLLVDCFFYEGIKVIFQVALAVLHD
NMDALLVCSDEGEAMTVLGRYLDNVVNKQTVAPPTPHLHALLTSGDDPPPEIDVFDLIKA
SYEKFGSLRSDVIEQMRFKQRLKVIQSLEDTAKRSVVRAMMTELAFSIEELEELYCLFKS
KHMTSCYWGSSSSAAQRHDPSLPYLEQYRIDPVQFAQLFSALSPWVCGSHTPTLSARLFR
LLDQNQDGLVNFKEFSTGLSGMYHGDMTEKLKLLYKLHLPPALCAEEAESALEATHFFTE
DKLQESSFLSDLDSVRQQEVTSGEEPKNGGEDGEEKKEVKDYRYYLRMWAKEKEPKRETI
KDLPRMNQEQFIELCKTLYNMFSEEPSEQQLYHAIATVASLLLRIGEVGKKFGNGAKKAE
APPPVPPGEEGPGKGTSTDAQVCRALADAQLEPPAPPSDEETKDDTSVSSFSVVSSGSLQ
CEDIADDTVLVSGEERRGSALDADWSITFEQVLASLLTEPALVEYFERKMDIQAKMAACK
AQRAVERQISSASDHELSQQSS
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgtggatcgaaccggaggaggttctgctggccggggctctttgggtctcggagcgggcc
aacccgttcttcatcctgcagaggaggagggggcacggccgcggaggggggctgtccggt
cttctggtgggaacgctggacgtggttctggactccagtgccagggtggctccctacagg
atcctgctgcagaccgccgactcccagatctactggaacattgcctgtggctcgtcgagg
aaggagatcacggagcactgggatttcctggaatccaacctgctgcagacgatctccatc
ttcgacaacgatgaagacgtcatcaccttcgtcaaaggaaagatctcgggcatcatcgcg
gaggagaaccgactgaagcggagcgaggagcaggaagagaacagcgggaagttcctggag
gcggagctgaagatgcggaagctgtttgggatgccagaggaggagaagctggtgaactat
tactcctgcagctactggaaggggcgtgtcccgcgccagggctggctctacctgtccatc
aaccacctgtgcttctactccttcctgctggggaaggaagtgacgctggtggtgcagtgg
accgaggtgacccagctggagaagaacgccaccctggtgttcccggagagcgtccgcgtg
agcacccggaacgccgagcatttcttctccatgttcctgaacgtcaacgacaccttcaag
ctgatggagcagctcgccaacatcgccatgcgccagctgctggacaatgaggcgttcgct
gccgaccgctcgctgcccaaggcctgcaagacgctgaagaacgtctctgccctgaagagg
gacttcgacgcccgggccaagaacgagcggtaccggtccatgttccggctgacgcaggac
gagcggctggacggacacacggactgcacgctgtggacgccgttcgccaagatgcacgtg
gtgggccagctgttcatctccaacaactacatctgcttcagcagcagagaggaggacctg
tgccagctcatcatcccactcagagaggtgaccatcgtggagaaggcggacagcagcagc
gtcttgccgtgtcccgtctccatcagcaccaagaataagatgaacttcctgttcgccaac
ctcaaagacagggacttcctggttcagcggatctcagacttcctgcagcggacgccggac
ggctcgtggagcgacaccaacccgctgtctctgattggctcctcggtacgccaggcctgg
ctgtcagaaccttgtggttctggttctgtctcatgtctctctgttcccagggctccaccg
gcgtcccccaatccgcaggatccgactccgtccacgaggggcgccattaccacggcggcc
cccaccgcccagcagggcctgctgcggctgttccagcaggacggcccggaggacctcggc
ccgaaagctatgaaggagcggatgaaggaggaggcgtggaacattcacttctccgagttc
ggccggggcgtctgcatgtacagaacctccagaacccgagagctggttctgaacgggatc
ccggagcgcctgaggggggagctgtggctgctgttctccggcgctcagaacgagatggcc
tcccaccctggctactatggcgacctggtggagcaggccacgggcctctgctcattggct
accgaggagatcgagcgcgaccttcatcgctcgatgcccgagcacagagccttccagaac
gagacgggcatcgccgcgctgcgccgcgtcctgaccgcctacgcccaccgcaaccccaac
atcggctactgccaggccatgaacatcgttacatccgtcctgctgctgtacggaaccgag
gaggaggccttctggctgctggtggcgctgtgcgagcgcatgctgcccgactactacaac
acccgggtcgtaggagcgctggtggaccaggccgtgtttgaggagctgacccgggccttc
ctgccgccgctctatgaccacatgcaggcgctgggcgtcatcaccaccatcagcctgtcc
tggttcctcaccctcttcctgtccgtcatgccgttcgacagcgccgtcctgctggtcgac
tgcttcttctacgaaggcatcaaggtcatcttccaggtggcgctggccgtccttcacgac
aacatggacgccctgctggtctgcagcgacgagggcgaggccatgaccgtcctgggcagg
tacctggataacgttgtgaacaagcagacggtggctccgcccactccccacctgcacgcc
ttgctgacgagcggagacgaccctccgccggagatcgacgtcttcgacctcatcaaggca
tcctatgagaagtttggcagcctgcgctctgatgtcatcgagcagatgcgttttaagcag
aggttaaaggtcattcagtcgctggaggacacggcgaagcggagcgtggtgagggcgatg
atgacggagctggccttcagcatcgaggagctggaggagctttactgtctctttaagtcc
aagcacatgactagctgctactggggctccagcagctcggcggcgcagcgacacgacccc
agcctgccctacctggagcagtaccggatcgacccggtccagttcgcccagctcttctcg
gcgctgtccccctgggtctgcggaagccacacccccacgctgtcggcccggctcttcagg
ctgctggaccagaaccaggacgggctggtcaacttcaaagagttcagcaccggcctcagt
gggatgtaccacggcgacatgacggagaagctgaagctgctctacaagctccacctcccg
ccagctctgtgtgctgaggaggcggagtctgctctggaggccacacacttctttactgag
gacaaactacaagaatcctccttcctgtctgatctggattctgtgcggcagcaggaagtg
acatcaggtgaagaaccgaagaatggaggagaagatggtgaggagaagaaagaggtgaag
gactacaggtactacctgaggatgtgggccaaggagaaggagcccaagagggaaaccatc
aaggatttgcccaggatgaaccaggagcagttcatcgagctttgtaagacgctgtacaac
atgttcagcgaggagccgagcgagcagcagctgtaccacgccatcgccactgtggccagc
ctcctgctgcgcatcggagaggtcggcaagaagtttggcaacggcgccaagaaggccgag
gccccgcctcccgtcccgccgggggaggaggggcccggcaagggaacctcgaccgacgct
caggtgtgccgggctctggccgacgcccagctggagccgccggcgcctccatctgacgag
gagacgaaggacgacacgtcggtgtcgtcgttctcggtggtgagctccggctcgctgcag
tgcgaggacatcgccgacgacacggtgctggtcagcggcgaggagaggcggggaagcgcg
ctggatgctgattggtcaatcacctttgagcaagtgctggcctcactgttgacagaaccg
gcgctggtcgagtattttgagaggaagatggacatccaggccaaaatggctgcctgtaag
gcccagcgggccgtcgagcgccagataagctccgcctccgaccacgaactcagccagcag
tcctcctga
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