Xiphophorus hellerii (green swordtail): 116714581
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Entry
116714581 CDS
T07363
Symbol
tbc1d2
Name
(RefSeq) TBC1 domain family member 2A isoform X1
KO
K20165
TBC1 domain family member 2A
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116714581 (tbc1d2)
Membrane trafficking [BR:
xhe04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
116714581 (tbc1d2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH
PH_11
PH_3
PH_8
LMBR1
Motif
Other DBs
NCBI-GeneID:
116714581
NCBI-ProteinID:
XP_032411121
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All DBs
Position
23:354137..372750
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AA seq
1122 aa
AA seq
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MAGRQNIKSVITSRYVKNHVTQPRAFTPALTSLWKRDFSCSYFEVNSGSWVCLGRRGAGA
AGHEPLREGRETQTPTGKQQQQQPIRATGCRPLRMDGGSPASDSLPVPTDPVQMGPDSQN
QEAVHSGPDCLSGSAEPPSSPQSTRPEPPGSEQTEPGGSAGPESAPETSSGLVLQNPEAS
TDQDEEEPGSDPSEVLTAGPEEPGVHQNLQCSEELHQNPGEVLSAEEAGSAASCLGRPGR
TECLDLQNRQAPPPGGQVWPRPPGAAGEPRLCGFLQKQAGPLRAWKRRWFSYEQNQNQLF
YFRSPQDVAPLGRIRLSGATFTCPLNAESGTFHIQTPERTFILKAVSQELMLYWLQQLQV
KRWQHRDTSTGPDQTNTNNNNLTDDFLPRQHGPVGLVGEAAAAAPAQRSTLASVSIKHPL
IQIQNSVHSLRKRTSQDSSQSSVFYTDVLPWTGTGPEDSGAPADGPAADAAGQRSASPSL
SWRSKSRVSSSVSVPYGVAASSERTSRLQQDKQMLMEEVKAQKELVWILHKALEASQLEK
RSCSEFLAAQDERRRLELLRHGERLAADLRARLDGAKMEAEALRRRLDDRDAQLAELQEE
VRLLEEKNAAKQQVIMKLTDQVTSCLSDSSGSDQNQNHQNHKQLQQQMENLKDDLAAYQT
QNRFLNSEIYQLTKLWRKSSEQERSLMVKCAYLEATNCQMESRYLGVLRRLQEAKALAPE
QQEAVQRLIQDALGREAKGVVKLSADRDHDEYGFKIVPDYEVEDMKLLAKIQALEIRGHS
LLQQDSMERPLLARWAQYLAGRSEDDLCPSPEVKALLRSGVPQQYRQRVWRWLVRTRTRT
VWERHPQRYQQLCEKSRTSPHPACRQIQLDLHRTLTTNQNFSSPSSPALQQLRRVLLAFS
WQNPAVGYCQGLNRLAAVALLVLQSEEDAFWCLVALVDAIMPQDYYTKNLLASQADQRVL
KDFMAEKLPRLAAHLEGHGVDVSLVTFNWFLVVFVESLPSDILLPLWDAFLYEGSKVIFR
FALALFKYKEDDLLKIHDNVEIYQYLRFFTKTVTDSRKLAAIAFCDMNPFPRRLLRNRRA
LHLERLQGELQELEEQQKEFVTESAERKDKELDPASEDDDEL
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atggcaggccgtcagaacataaaatcagtgattacttcaagatatgtgaaaaaccacgtg
actcagccccgcgcctttactccagctctgacgtcgctctggaagcgggacttttcctgc
tcttattttgaagtgaatagcggaagttgggtgtgtttgggtcggagaggagcgggagcg
gcgggacacgagccgctgagagaggggcgcgagacacaaacaccaacaggtaaacaacaa
cagcagcagccaatcagagccaccgggtgccgcccactcaggatggacggaggaagtccc
gcctccgactcacttcctgttcccaccgacccggtccagatgggtccagactctcagaac
caggaggcggttcatagcggacccgactgcctgtctgggtcagcagaacctccttcaagc
ccacaatcaaccagaccagaacctcctggttctgagcagacggaaccaggaggttctgca
ggaccagaatcagctccagaaacaagttcaggcctggttctccagaacccagaagcctct
acagatcaggatgaggaggaacccggttctgatccgtctgaggttctgactgcaggacca
gaggaacctggagtccatcagaacctgcagtgttcagaagaactccatcagaaccctggt
gaggttctgtcggcagaggaagccggttctgctgcgtcctgtttaggtcgacccggccgt
acggagtgcctggacctccagaaccgtcaggccccgccccccggcggccaggtgtggccc
cgcccccccggcgctgcaggtgagcccaggctgtgcggcttcctgcagaagcaggcgggg
cccctgagggcctggaagcggcgctggttcagctacgaacagaaccagaaccagctcttc
tacttccgctcaccgcaggatgtggcgccgctgggccggatccgactgagcggcgccacc
ttcacctgtccgctgaacgccgagagcggcaccttccacatccagacgcccgaacgcacc
ttcatcctcaaggcggtgagtcaggagctgatgctgtactggctgcagcagctgcaggtg
aagcgctggcagcaccgtgacacgtctactggaccagaccagaccaacaccaacaacaac
aacctgacagacgacttcctgccgaggcagcatggtcctgtgggcctggtgggggaggcg
gcggccgccgctccggcccagcgctcgacgcttgccagcgtctccatcaaacacccgctc
atccagatccagaactcggtccacagtctgaggaagagaacgtctcaggactccagtcag
agctcagtgttctacaccgatgttctgccctggaccggaaccgggccggaggacagcggc
gcccccgcagatggccccgcggccgacgccgcaggtcagaggtcggcgtctccgtccctc
agctggaggtccaagtcccgggtctcgtcctccgtgtcggtcccctacggggtcgcggcg
tcctcggagcggacgtcccgcctgcagcaggacaagcagatgctgatggaggaggtcaag
gctcagaaggagctggtctggatcctccacaaggccctggaggcgtcgcagctggagaag
cgcagctgcagcgagttcctggcggcgcaggacgagcggcggcgcctggagctgctgcgg
cacggcgagcggctggcggcggacctgagggcccggctggacggcgccaagatggaggcc
gaggcgctgaggcgtcgcctggacgacagagacgctcagctggccgagctgcaggaagag
gtcaggctgctggaggagaagaacgccgccaagcagcaggtgatcatgaagctgactgat
caggtgacctcctgcctgtcggactcctctggttccgaccagaaccagaaccatcagaac
cacaagcagctccagcagcagatggagaatctcaaggacgacttggcggcgtatcaaacc
cagaaccggttcctgaactctgagatctaccagctgaccaaactgtggaggaaaagctcc
gagcaggagaggagcctgatggtgaagtgtgcgtacctggaggccaccaactgccagatg
gagagccgttacctgggtgtcctgcggaggctgcaggaggccaaagctctggctccggag
cagcaggaggccgtgcagcggctgatccaggacgccctgggaagagaggccaagggtgtc
gtgaagctgagcgcggacagggatcacgacgagtatggctttaagatcgtccccgactac
gaggtggaggacatgaagctgctggctaagatccaggcgctggagatccggggccacagc
ctgctgcagcaggacagcatggagcgccccctgctggcccgctgggcgcagtatctggcc
ggccgttctgaggacgacctgtgtccgtctccggaggtcaaggctctgctgcgctccggc
gtccctcagcagtaccggcagagagtgtggcgctggctggtccggaccagaaccagaacc
gtctgggagcgccacccccagcggtaccagcagctgtgcgagaagagccggacgtcgccg
cacccggcctgcaggcagatccagctggacctgcacagaaccctgaccaccaatcagaac
ttctcctcaccctcaagccccgccctccagcagctgcgccgcgtcctgctggcgttctcc
tggcagaacccggcggtcggctactgccaggggcttaacaggctggcggctgtcgcccta
ctggtactgcagagtgaggaagacgccttctggtgcctggtggcgctggtggacgccatc
atgcctcaggactactacaccaagaacctcctggcctctcaggccgaccagcgggtcctg
aaggactttatggcagagaaactcccccggctggcggcgcacctggagggtcacggggtc
gacgtgtcgctggtcaccttcaactggttcctggtcgtcttcgtggagagtctgcccagc
gacatcctgctgccgctgtgggacgccttcctgtacgagggctccaaggtgatcttcagg
ttcgctttggctctgttcaagtacaaagaagacgacctgctgaagatccacgacaacgtg
gagatctaccagtacctgcgcttcttcaccaagaccgtcaccgacagcaggaagttggcg
gccattgctttctgcgacatgaacccgttcccgcggcgcctgctgaggaaccggcgcgcg
ctgcacctggagcgcctgcagggggagctgcaagagctggaggagcagcagaaggagttt
gtgacagagagcgccgagcggaaagacaaggagctggaccccgccagcgaagacgatgac
gagctttaa
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