KEGG   Xiphophorus hellerii (green swordtail): 116714611
Entry
116714611         CDS       T07363                                 
Symbol
rnf4
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4 isoform X1
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
xhe  Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xhe04121]
    116714611 (rnf4)
Enzymes [BR:xhe01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     116714611 (rnf4)
Ubiquitin system [BR:xhe04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    116714611 (rnf4)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4 zf-RING_5 zf-C3HC4_3 zf-RING_4 zf_RING_Vps8 zf-rbx1 zf-C3HC4_4 Rtf2 Prok-RING_4 zf-RING_6 TRAF3_RING zf-RING_10 zf-UDP zf-P11 zf-RING_11 PD-C2-AF1 zf-RING_16 zf-ANAPC11 Zn_ribbon_6 IBR_1 DZR HypA
Other DBs
NCBI-GeneID: 116714611
NCBI-ProteinID: XP_032411180
LinkDB
Position
23:588287..595749
AA seq 196 aa
MSSSVSRLDLQPPDQAQRKRRPAGNSLVSRTKTSRAASGRTRRTAGAGDHAPPTEPIDVM
DGAEDGVEEVVDLTCEGSESAVVDLTTNNESELLVDEGPPGESYVLSSDEDEDAPTVVQA
AITSTAHTSRLTPGLISCPVCLDLYSEIVESGRLVVSTKCGHVFCSQCLRDALTSSHTCP
TCRKRLTSRQYHPLYI
NT seq 591 nt   +upstreamnt  +downstreamnt
atgagcagctcggtgagtcggttggatctgcagccacctgatcaggctcagaggaagcgg
cggcccgccggaaactctctggtctccagaaccaagaccagcagagcggccagcggtcgg
acccgcaggacagccggcgccggagaccacgccccccccacggagcccatcgacgtgatg
gacggcgccgaggacggtgtggaggaggtggtggacctcacctgcgagggatcagagtct
gctgtggttgacctgacgaccaacaacgagtcggagctgctggtggacgaagggcctcca
ggtgagagctatgtactcagcagtgatgaagatgaagacgcgcccactgtcgttcaagct
gccatcacctctactgcacacacgtccaggttgactccaggtctcatcagctgtcccgtc
tgtctggacctgtactccgagatcgtagagagcgggcgattggtcgtctccacgaagtgc
ggccacgtgttctgcagccagtgtctgagggacgctctgacatcatcacacacctgcccc
acctgcaggaagcggctcacttcgcgccagtaccaccctctttacatctga

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