Xiphophorus hellerii (green swordtail): 116714659
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Entry
116714659 CDS
T07363
Symbol
ssrp1
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116714659 (ssrp1)
03036 Chromosome and associated proteins [BR:
xhe03036
]
116714659 (ssrp1)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
116714659 (ssrp1)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
116714659 (ssrp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
POB3_N
SSrecog
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
FERM_C1_MyoVII
Motif
Other DBs
NCBI-GeneID:
116714659
NCBI-ProteinID:
XP_032411232
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Position
23:complement(15733262..15745721)
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AA seq
710 aa
AA seq
DB search
MGDMLEFNDIYQEVKGSWNDGRLRFSKQSVVYKNNKTGKVDSIPAGELNQAQWRRVCLGH
GIKLGTSTGHIYKYDGFRDTDFEKLSEFFKSNYKMELSEKDMSVKGWNWGTAKFSGPLLS
FDINDHTAFEIPLSNVSQCATGKNEVTLEFHQNDDTEVSLMEVRFYVPPSQTDERQDPVE
AFAQNVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDINLTLNMSEEDVEKRFE
GKLSKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLNIKNRGFKEKKGMKGKIDEYSDSDEDQHDAYLERMKAEGKIREEGNDSDDSDGSGS
DESFNPGEEDEEIAEEYDSNASASDSSDEGDDSEDESAKKKAKKAKVVKEKKERKPRKEK
KQKDKAGPKRPMSAYMLWLNSSRERIKSENPGISITEISKKAGEMWRQLNKDEKEEWETK
AGEAKRQYDKLKKEYKESGGGSTSSPRKEKRKSGGKKDEKKRKSSGGEKEKERGGNDSFK
SREFIETSDDSSSDSDHKSKSKKKRKKKESEEEEEEEAVSTPASSEEESD
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgggggacatgctggagttcaacgatatctatcaggaggtcaaaggctcatggaatgac
ggacggctgcgtttcagcaaacagagtgtggtttataagaacaacaagactgggaaggtg
gacagcatcccggccggagagctcaaccaggcacagtggaggcgcgtgtgtttaggccac
ggcatcaaactcggcaccagcacggggcacatctacaaatatgacggcttcagggacacg
gactttgagaagctatcagagtttttcaagtcgaactacaagatggagttgtcagagaag
gacatgtctgtgaagggctggaactgggggacggccaagttctcaggaccgctgctgtcg
tttgatatcaacgaccacacagcgttcgagatccctctgtccaacgtttcccagtgtgcc
actgggaagaacgaagtcacactggagttccaccagaacgacgacaccgaggtttctctc
atggaggtccgattctacgtcccgcccagtcagactgacgaacgacaagaccctgtggag
gcgttcgcccagaacgttttgtcaaaggctgatgtcattcaggccacaggagacgctgtt
tgtatcttcaaggagcttcagtgtctcactcccagaggaagatatgatattcggatctat
ccgacattcctccacttgcacggtaaaactttcgactacaagattccctacaccaccgtg
ctgcgactcttcctgctgcctcacaaggatcagcggcagatgttctttgtgatcagtctg
gatcctcccatcaagcagggtcagacgcgttatcacttcctcattctgcttttttctaag
gaagaggatatcaacctaaccctcaacatgagcgaggaggatgtggaaaaacgcttcgag
ggcaaactcagtaaaaacatgtctggctctctttatgagatggtcagcagggtgatgaag
gccctggtcaaccgcaaaatcactgtgcctggaaacttccaaggccactctggcgctcag
tgcatcacctgctcctacaaggcgtcttcaggcctcctctaccctctggaaaggggcttc
atctacgtccacaagcccccggttcacctgcgctttgaggaaatctcctgcgtcaacttc
gccagaggcaccaccacgacgcggtcctttgactttgagatcgagaccaagcaaggaaac
cagtacacgttcagcagcatcgagagggaggaatatggcaaactgtttgactttgttaat
gccaagaagctcaacatcaagaacagaggcttcaaagagaagaagggcatgaagggcaaa
atcgatgagtacagcgactctgacgaagaccagcacgatgcctacctggagaggatgaag
gctgagggaaagatcagggaggagggcaacgacagtgacgattcagacggaagtggaagc
gacgagtctttcaaccctggagaggaagatgaggaaattgcagaagagtatgacagcaat
gcttctgccagcgacagcagcgacgaaggagatgatagcgaagacgagagcgcaaagaaa
aaggccaaaaaagctaaagttgtgaaagagaaaaaggaaagaaaaccacgcaaagagaag
aagcagaaggacaaagctggccccaagaggccgatgagcgcctacatgctgtggctgaac
tccagccgcgagcgcatcaagtcagagaaccccggcatctccatcacagagatatccaag
aaggccggagagatgtggagacagctgaacaaagacgagaaggaggaatgggaaacaaaa
gcaggggaggcaaagaggcaatatgacaaattaaagaaggaatacaaagaaagcggagga
ggatcgacctccagtcccaggaaagagaagagaaaatctggtggaaaaaaggatgagaag
aagagaaagtccagcggtggagagaaagaaaaggaacgaggaggaaacgacagcttcaag
agccgagagttcattgagaccagcgacgatagttcctccgactccgaccacaagagcaaa
tccaagaagaagaggaagaagaaggagtcagaggaggaagaggaggaggaagctgtatcc
actcctgccagctcagaggaagagtctgactga
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