Xiphophorus hellerii (green swordtail): 116715334
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Entry
116715334 CDS
T07363
Name
(RefSeq) neural cell adhesion molecule 1-like
KO
K06491
neural cell adhesion molecule
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
xhe04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
116715334
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116715334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116715334
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116715334
04090 CD molecules [BR:
xhe04090
]
116715334
00536 Glycosaminoglycan binding proteins [BR:
xhe00536
]
116715334
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
xhe00537
]
116715334
04091 Lectins [BR:
xhe04091
]
116715334
Membrane trafficking [BR:
xhe04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
116715334
Cell adhesion molecules [BR:
xhe04515
]
Immunoglobulin superfamily
NCAM1/2
116715334
CD molecules [BR:
xhe04090
]
Proteins
116715334
Glycosaminoglycan binding proteins [BR:
xhe00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
116715334
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
xhe00537
]
Others
116715334
Lectins [BR:
xhe04091
]
I-type lectins (Siglecs)
116715334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
Ig_DSCAM-DSCAML_C
fn3
V-set
Ig_4
Ig_6
Ig_5
Motif
Other DBs
NCBI-GeneID:
116715334
NCBI-ProteinID:
XP_032411769
LinkDB
All DBs
Position
3:complement(24782833..24791549)
Genome browser
AA seq
700 aa
AA seq
DB search
MLNQLAIILLFLPLVHSAGQATKLEIILSKQDFQVGEEMLLVCKATKEGDMTWHKGGEEI
DDEDIVSKLDYTTSKLLIKKASLSDGGTYTCMFESEDGHKVDAQSVIYVYEGPSFHGTTT
YHEFLEGANGVVPCLVTGQPAVDIAWLKDGELIPSTPGVRVRKMSDNTLHIEKVKRSDAG
TYICQAQIRGRAIYKQLPVSVVANAPPTVHIREEVKKVIAGPETNVSLLCLVDGLPKPNI
TWTLPFEFDPSRHLFNSDRSQLTIQSVVRADFGEYVCTAKNKIAESSATFMLHVFESPEV
FLSEDQHSVNVGERVSVSCNVTGHPQPELHWINKQNGEELDTTGRIQAVGGMLEIEEVIP
SDGGRYSCMAVGISGNASRDVVIETQPGPPHYLTVTPGPTSVLFTLKSFPINGGAPIKSF
VLQWKKSETDKWEESIVAASDVLAITNLKPYTKYIVRMAAINDVGQGQFSVDNTVRTEGK
QGEPDSPALSTSQAVVEGNSFSVPLQQIENGGSPLLHFNVQYKQVRDHETEESEWETLQL
PSDVNSVNLKNLAFGSDYHLEVRAINSNGSSVPAMLNFTIAEQPVSSKMTKGTVVGIVIL
IFLLVFLAVDATCCYRNRCGLLMAVAGKLTRWKDPSLKKVEEGEGTTNGDVTLKGLSKPR
DSIQQSEVQTVSKEAGQLSEVTCDKVPLTKNERLHPTANL
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaccaattagccatcatcttgctgttcttgccgctggtgcacagcgcaggtcaa
gctacaaaactggaaatcattttaagtaagcaagacttccaggtaggagaagagatgttg
ctggtatgtaaagccacaaaagagggagacatgacatggcataagggaggagaggagatt
gatgatgaagacatcgtctcaaagctggactacaccacctccaagctgctcatcaagaaa
gccagcctgtctgatgggggcacgtacacctgcatgtttgagtctgaagatgggcacaag
gtggatgctcagtcagttatctatgtctacgagggtccgtcatttcatggcaccaccacc
tatcatgagtttctggagggagcaaacggggtggtgccgtgtctggtgaccgggcagcca
gcggtggacattgcgtggcttaaagatggagaactaatcccttctacacctggagttcgt
gttcgtaagatgtccgacaacacgcttcatattgagaaagtgaaaaggagcgatgccggg
acgtacatctgtcaggcccagatcagagggagagcaatctacaagcagcttcctgtttct
gttgtcgccaacgctcctccgactgtgcatatcagagaagaagtgaagaaagtgattgct
gggcctgaaaccaatgtgtcattgctgtgtttggttgatggtctgccgaaacccaacatc
acttggactctgcctttcgagttcgatccgtcccgccacctcttcaactccgaccgcagc
cagctcaccatccagtccgtcgtcagggccgacttcggggagtacgtctgcacggccaaa
aacaagatcgctgagagcagcgctacgttcatgctgcatgtctttgagtctccagaggtg
tttctctcagaagatcagcacagtgtgaatgtgggtgagcgtgtctctgtgtcctgtaac
gtgactggtcacccgcagcctgagctgcactggatcaacaagcaaaacggagaagaactg
gataccactggtcgtatccaggcagtgggtggcatgctggagattgaggaagtgattccc
tccgatggcggacgctactcctgcatggctgtcggtatttctggaaatgcttcgagagat
gtcgtaattgagacccagcccgggccgccacattacctgacggtcaccccgggtccaacc
tctgtgctcttcacactcaaatccttccccatcaacggaggagcaccgatcaaaagtttt
gttctgcagtggaagaaaagtgaaacggataagtgggaggagtccattgttgcagcttca
gatgttttggctatcaccaacctcaagccgtacaccaagtatatagttcgtatggcagcc
ataaatgatgtgggacaggggcagttctcagtggacaacacggttcgcactgagggaaaa
caaggtgaaccagacagtccagctttatccacaagtcaggcagttgtggagggaaactcc
ttctctgttcctcttcaacaaattgaaaacggtggctctcctctgctgcacttcaacgtc
caatacaaacaggtgagagaccacgaaacagaagagagtgagtgggaaacactgcagctt
ccctctgatgttaattctgtcaacctgaaaaacctcgccttcggctcagactatcacctg
gaagtcagagccatcaactctaatggctcctccgtccctgcaatgctcaacttcacaatt
gcagaacagcctgtgagcagcaagatgaccaaaggcactgtggttggcatcgtgatattg
atcttcctgctggtgttcctggcagtggatgccacctgctgctacagaaaccgctgtggt
ctgcttatggccgtcgcagggaaactgaccaggtggaaagacccaagcctcaaaaaggtc
gaggaaggagaggggacaactaacggagatgtaacactgaagggtctctccaaacccaga
gacagtattcagcagtcagaggttcagacggtcagcaaagaagccggtcaactctcagag
gtcacctgcgacaaagttccactcaccaaaaatgagagattacaccccacagctaacctg
tga
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