Xiphophorus hellerii (green swordtail): 116715514
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Entry
116715514 CDS
T07363
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-3-like isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04080
Neuroactive ligand-receptor interaction
xhe04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116715514
04082 Neuroactive ligand signaling
116715514
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xhe04040
]
116715514
Ion channels [BR:
xhe04040
]
Ligand-gated channels
GABA-A
116715514
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
116715514
NCBI-ProteinID:
XP_032411819
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Position
24:complement(10617996..10675926)
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AA seq
544 aa
AA seq
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MDLYWEGLTRNMFHCWMLLLLSQGFVFNNVQGELPFMLGNNAAMLVNLNAVDGNKKLFAI
YDTSVNEPGNMSIVKETVDKLLKGYDIRLRPDFGGPPVAVGMSIDVASIDMVSEVNMDYT
LTMYFQQYWRDKRLAYIGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL
HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGESAVTGV
TRIELPQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWV
SFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVMVFLALLE
YAFVNYIFFGRGPQMQKKLAEKAEKANNERAAKYDAAREAGSRTASLKRSNQVKGLRHSR
SAEPHGHGNILLTTLEIHNEVAGGEITTSVADIRNSQSMVQLDSTASSNIQYRKQSGGVG
PRSTSRHSLDRSAQMKRSRLRRRSSQLKIKIPDLTDVNAIDRWSRIIFPSVFSLFNLIYW
LYYV
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggatctgtactgggaagggttgacaaggaacatgttccactgctggatgttactcctt
ctctcccaaggatttgtattcaacaacgtccaaggggaacttcctttcatgttggggaac
aacgctgcaatgctggtcaacttgaatgctgttgacggaaacaagaagttgttcgccatc
tatgacaccagcgtcaacgaaccgggcaacatgtccatcgtgaaggaaacggtggataaa
ctactgaaggggtacgacatccgactgagaccggactttggaggccccccagttgcagtc
ggcatgagtatagatgtggccagcatagacatggtgtcagaagtcaacatggactacacg
ctgaccatgtatttccagcagtactggagggacaagcgtctagcctacataggaatccca
ctaaacttgactctggacaacagggttgcagaccagctgtgggtcccagacacctacttc
ctcaatgacaagaagtcttttgtccatggagtcacagtcaaaaatcgcatgattcgcctt
cacccagacgggactgtcctatatgggctcaggataacaacaacagctgcttgcatgatg
gacctcaggaggtatcccctggatgagcagaactgcactctggagatagagagctatggc
tacaccacagatgacatcgagttctactggaagggaggcgagtcggccgtaaccggggtg
acgcggatcgagctgccgcagttctccattgttgactacaaactagtttccagaaatgtt
gtcttttccacaggtgcctatcctcgactgtcgttgagcttcaagctgaagaggaacatc
ggctacttcattttgcagacgtacatgccatcaatcctgatcaccatcctatcctgggta
tccttctggataaactatgatgcatctgcagccagggtggctcttggaatcaccacggtg
ctgaccatgaccaccatcaacacacacctgagggagacgctacccaagatcccatatgtc
aaggccatcgacatgtacctaatgggctgctttgtcatggtcttcctggcccttcttgag
tacgcctttgtcaactacatcttcttcgggaggggccctcagatgcagaagaagttggcg
gagaaagcagagaaggccaacaatgagcgagcggccaagtacgacgcagcaagggaggca
ggtagtaggaccgcatccctaaaacggtccaatcaggttaaaggtcttcgccactcacgc
tcggcggaaccacatggtcatggaaacatcctgctgacaaccttagagatccacaacgaa
gttgcaggaggtgagatcaccaccagcgtggcagacattagaaactctcagtccatggta
cagttggacagcacggcgtcgtcaaacatccaataccgcaagcagagcggtggggtgggg
ccacgctccaccagccgccactctctggaccgctctgcccagatgaagcggagccgacta
cggaggcggtcctcccagctcaaaattaaaatccccgacctgacggacgtgaacgccatt
gaccgctggtctcgcatcatctttccgtccgttttctcgctgttcaacctcatctactgg
ctctactatgtctga
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