Xiphophorus hellerii (green swordtail): 116715534
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Entry
116715534 CDS
T07363
Symbol
cars2
Name
(RefSeq) probable cysteine--tRNA ligase, mitochondrial isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116715534 (cars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xhe01007
]
116715534 (cars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xhe03016
]
116715534 (cars2)
Enzymes [BR:
xhe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
116715534 (cars2)
Amino acid related enzymes [BR:
xhe01007
]
Aminoacyl-tRNA synthetase
Class I (G)
116715534 (cars2)
Transfer RNA biogenesis [BR:
xhe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
116715534 (cars2)
Prokaryotic type
116715534 (cars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
CysS_C
DALR_2
WHD_ROXA
EFhand_Ca_insen
Motif
Other DBs
NCBI-GeneID:
116715534
NCBI-ProteinID:
XP_032411868
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All DBs
Position
24:complement(6224588..6231779)
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AA seq
552 aa
AA seq
DB search
MIRSGKALCGALISSCCVPVRHSVSGKAWITPKGFDTGIKTFNSLTKQKEALILAREGTA
TWYSCGPTVYDHAHLGHACSYVRFDILQRILTRVFGVTVIHAMVITDVDDKIIRRSWEEN
VSPDVISRMYEEEFKRDMLSLKVVPPAVYLRVTENVHHIVAFIEGIIRNGHAYATKEGDV
YFDVQSIGDRYGKFVGAASPHGQSGSSNKRDSRDFALWKRSKAQEPHWESPWGRGRPGWH
IECSTVASHMFGNQLDIHSGGIDLAFPHHENEIAQSEAFHQCGQWANYFLHSGHLHHKGS
PEKMSKSLKNYITIKDFLQSHTADEFRMFCLSTKYRSAIDYSDGSMSEARTSLETIRTFI
SAARAYMKGHLHCPPTQEDLLWQRLTETKSNILTALADDFDTPRAVGALMKLVYHGNCQL
RPVSTAEGGVRSPAVFGAMVTYVRDVLDAFGIDLLHSREADVMSSGGNLQAVVEQLTRFR
SEVRAFALTRQDPQDEKSDLCPDRIPLLKSCDTLRKDLAPLGVVIKDRGATSTWEIKPTQ
SGQRSHEPDQQT
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgatccggagtggaaaggccctctgcggggccctcatctccagctgctgtgtccctgtc
agacacagtgtttcgggaaaggcctggatcactcctaaaggctttgacacgggaataaag
accttcaacagcttgaccaaacagaaagaagctctgatcctggcaagagaaggaacagcc
acctggtacagctgtggacctacagtgtatgaccatgctcacctgggccatgcatgttct
tatgtcaggtttgacatcctgcagaggatcctgaccagggtgtttggtgtcaccgtgatc
cacgccatggtcatcactgacgtcgacgacaagatcatcagaagaagttgggaggaaaat
gtttctccagatgtcatttccagaatgtatgaggaggaattcaagagggatatgctgtcg
ttaaaggtggttccccctgccgtgtatctaagagtcacggagaacgtgcatcatatcgtt
gcatttattgaagggatcatcagaaatgggcacgcttatgccacaaaggaaggcgacgta
tattttgacgtgcagtccattggtgaccgctatgggaagtttgttggcgctgctagccct
catggacagtctggtagctcaaacaaacgagactccagggattttgctctgtggaagcgc
tctaaagctcaggagccacactgggaatctccgtggggccgaggaagacccggctggcat
atcgagtgctccactgttgccagccacatgtttgggaatcagctggatattcactctgga
ggaatcgacctggccttccctcaccatgagaacgagatcgctcagagcgaagcctttcat
cagtgtggacagtgggccaactacttccttcattcaggtcatttacaccataaaggcagt
ccagagaaaatgtctaaatctctgaagaactatatcactatcaaggattttctacagtct
cacactgctgacgagtttcggatgttttgtctgtcgaccaaatatagatctgccatagat
tacagtgacggcagcatgtcagaggcccgcacctctctggaaaccatccgtacctttatt
agtgccgctcgggcctacatgaagggccacctccactgtccgcctacgcaggaggatctt
ctctggcagagactgactgaaactaaatccaacatcctgacagcgctagccgatgacttt
gacacgcccagagccgtcggtgcactgatgaagttggtttatcatggaaattgccagctg
cggcccgtttctacggcagagggaggggttcggagcccagcggtgttcggagccatggtg
acctacgtcagagatgtgctggacgcgttcgggatcgacctgctgcacagtcgggaggcc
gacgtgatgagcagcggcggaaatctgcaggctgtggtggagcagttgactcgtttcaga
agcgaggtccgagcgttcgctctgacccgtcaggaccctcaggatgagaaatctgacttg
tgcccagacagaatcccgctcctgaaatcctgcgacaccctcaggaaggacctggccccg
ttaggagtggtgataaaggacagaggagcgacgtccacctgggagataaagccgactcag
agcggacagagaagccacgaaccggaccagcaaacatga
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