Xiphophorus hellerii (green swordtail): 116715566
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Entry
116715566 CDS
T07363
Symbol
ddx4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116715566 (ddx4)
Enzymes [BR:
xhe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116715566 (ddx4)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Gene silencing
piRNA pathway
116715566 (ddx4)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
116715566
NCBI-ProteinID:
XP_032411919
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Position
24:6309208..6317097
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AA seq
607 aa
AA seq
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MDEWEEEENKATTFTAASYSSNDAAGRDSWKSEHGEFGRDGDSRESNEDGERHGFSGRGG
REDGDGAHENGFRGRGRGGRGGRGGFRQDAEQGGRGGFGGGYRGKDEETFNPGEDKGSVK
DDPDSDKPRVTYVPPTLPEDEDSIFSHYKSGINFDKYDDILVDISGTNPPRAIMTFDEAA
LCESLRKNISKSGYVKPTPVQKHGIPIISAGRDLMACAQTGSGKTAAFLLPILQQLMTDG
VAASRFSETQEPEAVIVAPTRELINQIYLEARKFAYGTCVRPVVVYGGVSTGHQIREILK
GCNVVCGTPGRLLDMIGRGKVGLSKVRYLVLDEADRMLDMGFEPDMRRLVGSPGMPSKEN
RQTLMFSATYPEDIQRMAGDFLKLDYLFLAVGIVGGACSDVEQKFVQVTKFSKREQLLDI
LKTTGTERTMVFVETKRQADFIAVFLCQEKVPTTSIHGDREQRERELALTDFRSGKCPVL
VATSVAARGLDIPDVQHVVNFDLPKDIDEYVHRIGRTGRCGNVGRAVSFFDPEVDGGLAR
SLVTVLSKAQQEVPPWLEESAFSSHGAGFNPRKTFGSTDSRKTGSFQESSGKSQAAAQAA
ADDEEWE
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtgggaagaagaggaaaataaagcaactacatttacagcagccagctattcc
tctaatgatgcggcaggaagagactcatggaaaagtgaacatggtgaatttggacgagac
ggagacagcagggaatctaacgaagacggggaaagacatggtttcagtgggagaggaggt
cgagaggatggtgatggagctcatgagaatgggttcagagggcgaggaagaggaggtcgg
ggaggaagaggaggattcagacaagatgctgagcagggaggaagaggaggctttggtgga
ggttaccgtggaaaagacgaagagaccttcaatccaggagaagacaaaggttcagttaag
gacgaccctgatagtgacaaaccgagagtcacatacgttcctccaacgctccctgaagac
gaagactccatcttctcccattataagagtggaatcaactttgacaagtacgacgacatc
ttggtggacatcagcggcaccaacccccccagggccatcatgacctttgacgaggcggcc
ctgtgtgagtccctgaggaaaaacatcagcaagtctggctacgtgaagccgaccccggtg
cagaagcatggcatccccatcatctctgcaggcagagacctcatggcctgtgcacagacc
ggctctgggaagacggctgctttcctgctgcccatcctgcagcagctcatgacggacggc
gtggcggccagtcgcttcagtgagacacaagaacccgaagccgtcatagtcgctccaacc
agagaactcatcaaccagatctacctggaggctaggaagtttgcttatgggacgtgtgtc
cgacctgttgtggtctatggaggagtcagcactggacaccagatcagggaaatcctgaaa
ggatgtaacgtggtgtgtggaactcctggacgtctgctggacatgattgggagaggaaag
gtgggactgagtaaggtgcggtacctggtgctggacgaggccgaccggatgttggacatg
ggctttgagccagacatgcggcgcctggttggctcccctggaatgccgtccaaggagaat
cgtcagactctaatgtttagcgccacctaccctgaagacatccagaggatggctggtgac
ttcctaaagctggattatctgttcctggctgtgggcattgtgggcggagcctgcagcgat
gtggaacagaagtttgtacaagtcaccaagttctccaagagagagcagctgcttgatatc
ctcaaaaccacaggaacggagcgtaccatggtgtttgtggagaccaagagacaagcagac
ttcatcgctgtgttcctgtgccaggagaaagttccaaccaccagcatccatggtgaccga
gagcagagggaacgggagctggctttgacagatttccgctctgggaaatgtcctgttctg
gtggccacctctgtagctgcccgtggtctggacattccagatgttcagcatgtggtgaac
tttgacctaccaaaggacatcgacgaatacgtccatcgtattgggagaactgggcgctgt
gggaacgttgggagagctgtgtcattctttgacccagaggttgacggggggttggcccgc
tccctggtcacggttctgtccaaggcgcagcaggaagtgccgccttggttggaggagtct
gccttcagcagccacggcgccggcttcaaccccaggaaaacattcggctccacggattcc
agaaagacgggctccttccaggagagcagcgggaagagccaggctgctgctcaggctgca
gctgatgacgaggaatgggagtga
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