Xiphophorus hellerii (green swordtail): 116715623
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Entry
116715623 CDS
T07363
Name
(RefSeq) CLIP-associating protein 1-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116715623
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xhe04812
]
116715623
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
116715623
Cytoskeleton proteins [BR:
xhe04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
116715623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
HEAT_EZ
TOR1L1_N
Adaptin_N
HEAT_2
Cnd1
Sec7-like_HUS
ParcG
HEAT_DAAF5
MMS19_N
MMS19_C
MOR2-PAG1_C
TAN
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
116715623
NCBI-ProteinID:
XP_032412023
LinkDB
All DBs
Position
24:17183379..17206839
Genome browser
AA seq
1592 aa
AA seq
DB search
MEEDEEEKMSSMEDLLDLVLQKDLGRRLQVGPEITELLLHPDRCPGLDQDQNLLDRMVDA
LASSWVNSSNYKVVLLGMEVLSALVDRLQERFRTQVGTVLPSLMDRLGDSKDQVREQDQA
LLLKVMDQSANPQYVWERMMGGFKHKNSRTREGLCLCLISTLNVFGSQSLTLNKIVPHIC
NLLGDPTSQVRDAAMSCLVEIYRHVGERVRIDLGKKGLPQSRLNMIFSKFDEVQRSGVMV
PSPLSDKTFEDDESVDGGRSSSRAASVSGRKAVSMGSFRRPSSASSSKSAGRDGSSAGAV
DEEDFIQAFEDVPTVQIYSNREVEEAMTKIRDVLSDDKKDWELRVAALKKLRSLLLAGAP
EFDCFLQQLRLLEASFKLSAKDLRSQVVREACITLGHLSAVLGSRFDHAAEAIMPPLLNL
VPNSAKVMATSGVAAIRLILRHTHCPRLVPIISSSCSSKSVAVRRRCFEFVDLMLQEWQT
SSLDRHGALLMETIKKGIHDADAEARSVARKCYWSYQGHFSREAELLFQGLESAYQRALQ
AHLRSGDALVSLPASDRSSSSSQESLNRPLAMKSSAGSSSSRGQHQGQHQGSAPRRPGAA
SSPGVLQRSRSDVDVNASASARSRMPAVSAAAATLPPGSYASLGRVRTRRTSAGTGATAT
DGRSRGKVVSQSQPGSRSGSPGRLLSSTYGRILRPAAGSNGAPCSVSDKTRPRGHRSQGC
SRETSPSRTAAARSRIPRPSMSQGCSRETSRESSRDTSPARGFSPLASRPHSRSTSALSS
AEGCSDRLAHQARISASVNAMRVLNTGTEVEAAVADALLLGDSRSSKRRPVRRRFESPGI
YSDDDANSDASSACSERSFGSRNGGAGPHFLRQTEDVAEVLNHCASSNWSERKEGLLGLQ
NLLKGQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIVLHRDDLQDWLFVLL
TQLLKKMGADLLGSVQAKVQKALDVTRDSFPLELQFNILMRFIVDQTQTPNLKVKVAILR
YIEALARQMDPADFVNSSETRLAVSRVITWTTEPKSADVRKTLHTWAGEDRSSAASLPRE
GHLEERCKQAAQVVLIALFELNTPEFTMLLGALPKTFQDGTTKLLHSHLRSASAGIAMAA
PGDWAGRTPPRPPGSRSSPLTSPTNHGGLSPSRLWGWSADGLSKYPPLPPFPSPLPPTAS
LKALRRAYSPSMLEYDSENLNTEDLYGSLRGVSEAIQNFSFRSQEELVEPLRRDGKRDGT
AGVAAASDPERRFCGDVTEGGRTALDNKTSLLNTPSPRSFSGPRFREYNPYNYTDSSPEK
PGPEDGAEPQRDGRRQECGENKTQNAKSFPAGSAEQLELVGQLLKELSQAGDQEDRRGTL
LELLKVARQDSLLVWDEHFKTLLLLLLETLGDKDHSVRALALRVLKEILRNQPARFKNYA
ELTIMKTLEAHKDSHKEVVRAAEEAASALAGSIHPEQCIKVLCPIVQTTDYPVNLAAIKM
QTRAVERVCREPLLQLLPDVVPGLLQGYDNTESSVRKASVFCLVAVYAVIGEELKPYLSQ
LTGSKMKLLNLYIKRAQTSTSNSSSSSDISSY
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacgaggaggagaagatgagcagcatggaggacctgctggacctggttctg
cagaaagacctgggccggcggctgcaggtggggccggagatcaccgagctgctgctccac
ccggaccgctgtcccgggctggaccaggaccagaacctgctggacaggatggtggacgcc
ctggccagctcctgggtcaactccagcaactacaaggtggttctgctggggatggaggtt
ctgtcggctctagtggaccggctgcaggagaggttccggactcaggtgggaacagtcctg
cccagcctgatggaccggctgggcgactcgaaggaccaggtgcgggagcaggaccaggcg
ctgctgctgaaggtcatggaccagtcagccaaccctcagtacgtctgggagcgcatgatg
ggagggttcaagcacaagaacagccggaccagagagggactctgcctctgcctcatctcc
accctcaacgtgtttggctctcagagtctgacgctgaataaaatcgttcctcacatctgc
aacctgctgggagacccgaccagtcaggtccgtgatgcagccatgtcctgcctggtggag
atctaccgccacgtaggagagcgagtgagaatcgacctggggaagaaagggctgcctcag
tcacggctcaacatgatcttcagtaagttcgacgaggtccagaggtcaggggtcatggtg
ccgtctcctctgtcagacaaaacctttgaggacgatgagtcggtggacggcggacgttcc
tcgtccagagcagcctctgtgtctgggaggaaggcggtgagcatgggctcgttccgacgg
ccgtcctcggcctccagcagcaagtctgcagggcgggacggatcgagtgcaggagctgtg
gatgaggaggatttcatccaagcctttgaggacgttcccacagttcagatctactccaac
cgggaggtggaggaggccatgacgaagatccgggacgttctgtcggacgataagaaggac
tgggagctgagagtggccgccctgaagaagcttcgctcgctgctgctggccggagcgccg
gagttcgactgcttcctgcagcagctgcggctcctggaggcgtccttcaagctgtccgcc
aaagacctgcggtctcaggtggtccgggaggcctgcatcacgctgggccacctgtcggcg
gtgctgggcagccgcttcgaccacgccgccgaggccatcatgccgcccctcctcaacctg
gtgcccaacagtgccaaagtcatggccacgtcgggcgtggccgccatccgcctcatcctc
agacacacacactgtcctcgcctcgtccccatcatcagcagcagctgctcctccaagtct
gtggctgtcagaagacgctgctttgagtttgtggacctgatgctgcaggagtggcagacc
agcagcctggacagacatggagcgctgctgatggagacgataaagaaggggatccatgat
gctgatgctgaagctcgatctgtagccaggaagtgctactggagctaccagggtcacttc
agccgggaggcggagcttctgttccagggcctggagtcggcctatcagagagctctgcag
gcccacctgcggagcggagacgccctggtgtcgctgccggcctccgaccgctcctcgtcc
tcgtctcaggagagcctgaatcggccgctggcgatgaagagctcagcaggaagcagcagc
agcagaggtcaacatcaaggtcaacatcaaggcagcgccccccgcaggccgggagccgcc
tcgtccccaggcgttctgcagcgatcccgcagcgacgtcgacgtcaacgccagcgccagc
gcccgcagcaggatgcccgccgtcagcgccgccgccgccactcttcctcctggatcctac
gcttcgctggggcgagtccggaccaggaggacgagcgccggaaccggtgccacggcgacg
gacggccggagccgagggaaagttgtctctcagtcccagcccggcagccggtccggttct
ccgggccgcctgctcagctccacgtacggccggatcctgaggcccgccgcaggcagcaac
ggcgccccctgcagcgtgagcgacaagacgcgaccccgaggtcaccgcagccagggctgc
agccgagagaccagtccgtccagaaccgcagccgcccggagtcggatccctcggcccagc
atgagtcagggctgcagccgggaaaccagtcgcgagagcagccgcgacaccagccctgcc
aggggcttctccccgctggccagccggcctcattcccgttccaccagcgccctgtcctct
gcagagggctgctcagaccggctggcccaccaggcccggatctcggcctccgtcaacgcc
atgcgggtcctgaacacgggcaccgaggtggaggcggccgtggccgacgctctgctgttg
ggagactccaggagtagtaagcggcggcccgtccggcggcgctttgagtctcccgggatc
tactctgacgacgacgccaacagcgacgcctccagcgcctgctccgagcgctccttcggc
tccaggaacggcggcgccgggccccacttcctgcggcagacggaggacgtggcggaggtc
ctgaaccactgcgccagctccaactggtcggagaggaaggagggcctgctgggcctgcag
aacctgctgaagggccagaggacgctcagccgtgtggagctgaagagactctgtgagatc
ttcaccaggatgtttgcagacccgcacagcaagagagtgttcagcatgttcctggagacg
ctggtggacttcatcgtcctgcaccgggacgacctgcaggactggctcttcgtcctgctc
actcagctactgaagaagatgggcgccgacctgctgggctcggtccaggccaaggtccag
aaggctctggacgtcaccagggattcgttccccctggagctgcagttcaacatcctgatg
cgcttcatcgtggatcagacccagacgcccaacctgaaggtcaaggtggccatcctgcgc
tacatcgaggctctggcccggcagatggacccggccgacttcgtcaactccagcgagacg
cgcctggccgtctcacgcgtcatcacctggaccaccgagcccaagagcgccgacgtccgc
aagacgctccacacctgggcaggtgaggatcgcagctccgccgcctctctgccccgggag
gggcatctggaggagaggtgcaagcaggcggcccaggtggttctgatcgccctgtttgag
ctcaacaccccggagttcaccatgctgctgggagccctgcccaaaaccttccaggacgga
accaccaagctgctgcacagccacctgaggagcgccagcgccggcatcgccatggcggct
ccaggcgactgggccggccggacgcctccccgcccccccggcagccgcagcagccctctg
acctcgcccaccaaccacggcggcctctcccccagtcggctgtggggctggagcgccgac
ggcctctccaaataccctcctcttcctcccttcccctcccctcttcctcccactgcctcc
ctcaaggccttacggcgagcgtactctcccagcatgctggagtacgacagtgagaacctg
aacaccgaggatctgtacggctccctgcgcggcgtctctgaggccatccagaacttcagc
ttccgcagccaggaggagctggtggagccgctgcggcgggacgggaagcgggacggaacg
gctggcgtggcggcggcgtcggacccagagcgccggttctgtggcgacgtgacggagggc
ggccggacggctctggacaacaagacgtccctgctgaacacgccttcgcctcgctcgttt
tccgggccgcgcttcagggagtacaacccctacaactacacagacagctcgccggaaaag
cccggcccggaggacggcgccgagccgcagagagacggccggcggcaggagtgcggagaa
aacaagactcagaacgccaagagctttccagccgggtcggcagagcagctggagctggtg
gggcagctgctgaaggagctgtcccaggccggggaccaggaggacaggcgggggacgctg
ctggagctgctgaaggtggcccgccaggacagcctgctggtgtgggacgaacacttcaag
accctgctgctgctgctgctggagacgctgggcgacaaagaccactcggtccgggcgctg
gctctccgggttctgaaggagatcctgcggaaccagccggcccggttcaagaactacgca
gagctgaccatcatgaagacgctggaggctcacaaggactctcacaaagaggtggtgcgt
gcggccgaggaggcggcctccgccctggccggctccatccacccggagcagtgcatcaag
gtgctgtgccccatcgtccagaccaccgactaccccgtcaacctggcggccatcaagatg
cagactcgcgcggtggagcgcgtctgcagggagccgctgctgcagctgctgccggacgtc
gtccccggcctgctgcagggctacgacaacacggagagcagcgtccgcaaggccagcgtc
ttctgcctggtggccgtctacgccgtcatcggagaggagctcaagccctacctgtcccag
ctgaccggcagcaagatgaagctgctgaatctctacatcaagagagctcagacctccacc
agcaacagcagcagctcctccgacatctcctcctactga
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integrated database retrieval system
